ATTED-II : GeneCoexpression result

Species	Gene	Description
cit-r.1	102612297	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
ath-u.5	CJD1	Chloroplast J-like domain 1
bra-r.6	103871607	uncharacterized LOC103871607
ghi-r.1	121223478	uncharacterized LOC121223478
ghi-r.1	107962960	uncharacterized LOC107962960
bna-r.1	111198164	uncharacterized LOC111198164
bna-r.1	106346317	uncharacterized LOC106346317
gma-u.5	100814672	uncharacterized LOC100814672
gma-u.5	100805399	uncharacterized LOC100805399
vvi-u.5	100243269	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
ppo-u.5	7487178	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
ppo-u.5	7474622	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
mtr-u.5	25499715	uncharacterized LOC25499715
sly-u.5	101248473	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
sot-r.1	102589954	uncharacterized LOC102589954
nta-r.1	107832639	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
nta-r.1	107779229	protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic
osa-u.5	4344571	uncharacterized LOC4344571
osa-u.5	4348904	uncharacterized LOC4348904
zma-u.5	100217132	Chloroplast J-like domain 1
zma-u.5	100272810	Chloroplast J-like domain 1
tae-r.2	123169808	uncharacterized LOC123169808
tae-r.2	123159367	uncharacterized LOC123159367
tae-r.2	123147480	uncharacterized LOC123147480
hvu-r.1	123407576	uncharacterized LOC123407576
sbi-r.1	8074057	uncharacterized LOC8074057
bdi-r.1	100821624	uncharacterized LOC100821624
cre-r.1	CHLRE_03g171100v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0031969 [list] [network] chloroplast membrane

(51 genes)

IEA

GO MF

Protein

XP_006487721.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, plas 1, E.R. 1, E.R._plas 1

(predict for XP_006487721.2)

Subcellular
localization
TargetP

chlo 9

(predict for XP_006487721.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102612297	ath-u.5 for CJD1	bra-r.6 for 103871607	ghi-r.1 for 121223478	ghi-r.1 for 107962960	bna-r.1 for 111198164	bna-r.1 for 106346317	gma-u.5 for 100814672	gma-u.5 for 100805399	vvi-u.5 for 100243269	ppo-u.5 for 7487178	ppo-u.5 for 7474622	mtr-u.5 for 25499715	sly-u.5 for 101248473	sot-r.1 for 102589954	nta-r.1 for 107832639	nta-r.1 for 107779229	osa-u.5 for 4344571	osa-u.5 for 4348904	zma-u.5 for 100217132	zma-u.5 for 100272810	tae-r.2 for 123169808	tae-r.2 for 123159367	tae-r.2 for 123147480	hvu-r.1 for 123407576	sbi-r.1 for 8074057	bdi-r.1 for 100821624	cre-r.1 for CHLRE_03g171100v5

Ortholog

Ortholog ID: 7784

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CJD1

Function^*

protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic

Chloroplast J-like domain 1

uncharacterized LOC103871607

uncharacterized LOC121223478

uncharacterized LOC107962960

uncharacterized LOC111198164

uncharacterized LOC106346317

uncharacterized LOC100814672

uncharacterized LOC100805399

protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic

uncharacterized LOC25499715

protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic

uncharacterized LOC102589954

protein CHLOROPLAST J-LIKE DOMAIN 1, chloroplastic

uncharacterized LOC4344571

uncharacterized LOC4348904

Chloroplast J-like domain 1

uncharacterized LOC123169808

uncharacterized LOC123159367

uncharacterized LOC123045702

uncharacterized LOC123407576

uncharacterized LOC8074057

uncharacterized LOC100821624

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7
cit00860	Porphyrin metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	4
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	3
gma01230	Biosynthesis of amino acids	3
gma00860	Porphyrin metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	4
gma01240	Biosynthesis of cofactors	4
gma00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	4
sot00860	Porphyrin metabolism	3
sot00061	Fatty acid biosynthesis	2
sot01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	3
nta01232	Nucleotide metabolism	3
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	4
nta01232	Nucleotide metabolism	4
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00230	Purine metabolism	2
nta00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	3
osa00300	Lysine biosynthesis	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2
zma04141	Protein processing in endoplasmic reticulum	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00261	Monobactam biosynthesis	3
tae00300	Lysine biosynthesis	3
tae01230	Biosynthesis of amino acids	3
tae00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5
tae00562	Inositol phosphate metabolism	3
tae00920	Sulfur metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	4
hvu00860	Porphyrin metabolism	3
hvu00300	Lysine biosynthesis	2
hvu01230	Biosynthesis of amino acids	2
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	4
bdi01240	Biosynthesis of cofactors	3
bdi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01230	Biosynthesis of amino acids	5
cre00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3

Expression

Expression pattern

Entrez Gene ID^*

102612297

837386

103871607

121223478

107962960

111198164

106346317

100814672

100805399

100243269

7487178

7474622

25499715

101248473

102589954

107832639

107779229

4344571

4348904

100217132

100272810

123169808

123159367

123045702

123407576

8074057

100821624

66052833

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102612297 (cit-r.1 coexpression data)

Top 50 enrichment test to 102612297 (cit-r.1 coexpression data)


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	1	2	2	2	1	2	1	1	1	2	2	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102612297 (cit-r.1 coexpression data)

Top 50 enrichment test to 102612297 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**