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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102631432   (-)-germacrene D synthase-like 
 cit-r.1   127898638   (E)-beta-farnesene synthase-like 
 cit-r.1   127898646   (E)-beta-farnesene synthase-like 
 ath-u.5   AT1G33750   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 ath-u.5   AT1G31950   Terpenoid cyclases/Protein prenyltransferases superfamily protein 
 bra-r.6   103874801   alpha-humulene/(-)-(E)-beta-caryophyllene synthase 
 bra-r.6   103874257   alpha-humulene/(-)-(E)-beta-caryophyllene synthase 
 ghi-r.1   107925546   (+)-delta-cadinene synthase isozyme A 
 ghi-r.1   107903503   (+)-delta-cadinene synthase isozyme XC1 
 ghi-r.1   107903504   (+)-delta-cadinene synthase isozyme C2 
 bna-r.1   125577724   terpenoid synthase 25-like 
 gma-u.5   100802427   (-)-germacrene D synthase 
 vvi-u.5   100261959   valencene synthase 
 vvi-u.5   100261963   valencene synthase-like 
 vvi-u.5   100264159   (-)-germacrene D synthase 
 ppo-u.5   7454979   (-)-germacrene D synthase 
 ppo-u.5   7457170   probable terpene synthase 6 
 mtr-u.5   120576874   probable terpene synthase 2 
 mtr-u.5   120576878   probable terpene synthase 2 
 mtr-u.5   120576881   probable terpene synthase 2 
 sly-u.5   TPS32   viridiflorene synthase 
 sly-u.5   TPS33   viridiflorene synthase 
 sot-r.1   102580832   (-)-germacrene D synthase-like 
 sot-r.1   102583484   vetispiradiene synthase 3-like 
 nta-r.1   142175414   sesquiterpene synthase 12-like 
 nta-r.1   142165746   5-epi-aristolochene synthase-like 
 nta-r.1   142175466   sesquiterpene synthase 12-like 
 osa-u.5   9267045   alpha-copaene synthase 
 osa-u.5   4332895   eudesmanediol synthase 
 zma-u.5   542156   uncharacterized LOC542156 
 zma-u.5   100281754   terpene synthase 7 
 zma-u.5   100273678   uncharacterized LOC100273678 
 tae-r.2   123191554   tau-cadinol synthase 
 hvu-r.1   123439124   alpha-terpineol synthase, chloroplastic-like 
 sbi-r.1   8080793   alpha-humulene synthase 
 sbi-r.1   8080877   beta-sesquiphellandrene synthase 
 sbi-r.1   8085003   beta-sesquiphellandrene synthase-like 

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Top 50 coexpressed genes to 102631432 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102631432 (cit-r.1 coexpression data)

CoexMap"102614537"


citLOC102614537 | Entrez gene ID : 102614537    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 3 1 1 3 2 3 2 2 3 2 3 1 1 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016102 [list] [network] diterpenoid biosynthetic process  (59 genes)  IEA  
GO CC
GO MF
GO:0010333 [list] [network] terpene synthase activity  (50 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (120 genes)  IEA  
Protein XP_052290501.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 3,  chlo 1,  cysk_plas 1  (predict for XP_052290501.1)
Subcellular
localization
TargetP
other 6  (predict for XP_052290501.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102631432
cit-r.1
for
127898638
cit-r.1
for
127898646
ath-u.5
for
AT1G33750
ath-u.5
for
AT1G31950
bra-r.6
for
103874801
bra-r.6
for
103874257
ghi-r.1
for
107925546
ghi-r.1
for
107903503
ghi-r.1
for
107903504
bna-r.1
for
125577724
gma-u.5
for
100802427
vvi-u.5
for
100261959
vvi-u.5
for
100261963
vvi-u.5
for
100264159
ppo-u.5
for
7454979
ppo-u.5
for
7457170
mtr-u.5
for
120576874
mtr-u.5
for
120576878
mtr-u.5
for
120576881
sly-u.5
for
TPS32
sly-u.5
for
TPS33
sot-r.1
for
102580832
sot-r.1
for
102583484
nta-r.1
for
142175414
nta-r.1
for
142165746
nta-r.1
for
142175466
osa-u.5
for
9267045
osa-u.5
for
4332895
zma-u.5
for
542156
zma-u.5
for
100281754
zma-u.5
for
100273678
tae-r.2
for
123191554
hvu-r.1
for
123439124
sbi-r.1
for
8080793
sbi-r.1
for
8080877
sbi-r.1
for
8085003


Ortholog ID: 38
Species cit cit ath ath bra bra ghi ghi ghi ppo mtr mtr mtr sly sly sot nta nta nta osa zma zma tae hvu sbi
Symbol LOC102631432 LOC127898638 AT1G33750 AT3G29410 LOC103849526 LOC103849591 LOC107903503 LOC107903500 LOC107903499 LOC7454979 LOC120577043 LOC120580864 LOC11426332 TPS35 SSTLE1 LOC102592011 LOC142175522 LOC107793666 LOC107774988 LOC4332831 LOC103641097 LOC103641099 LOC123191554 LOC123439124 LOC8064774
Function* (-)-germacrene D synthase-like (E)-beta-farnesene synthase-like Terpenoid cyclases/Protein prenyltransferases superfamily protein Terpenoid cyclases/Protein prenyltransferases superfamily protein alpha-humulene/(-)-(E)-beta-caryophyllene synthase alpha-humulene/(-)-(E)-beta-caryophyllene synthase (+)-delta-cadinene synthase isozyme XC1 (+)-delta-cadinene synthase isozyme XC14-like (+)-delta-cadinene synthase isozyme C2 (-)-germacrene D synthase probable terpene synthase 2 probable terpene synthase 2 probable sesquiterpene synthase alpha-humulene_(-)-(E)-beta-caryophyllene synthase sesquiterpene synthase 1 vetispiradiene synthase 3-like sesquiterpene synthase 12-like vetispiradiene synthase 3 sesquiterpene synthase 9-like tau-cadinol synthase (S)-beta-macrocarpene synthase (S)-beta-macrocarpene synthase-like tau-cadinol synthase alpha-terpineol synthase, chloroplastic-like alpha-humulene synthase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00909 Sesquiterpenoid and triterpenoid biosynthesis 3
cit00940 Phenylpropanoid biosynthesis 2
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 4
bra04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00909 Sesquiterpenoid and triterpenoid biosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00909 Sesquiterpenoid and triterpenoid biosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00909 Sesquiterpenoid and triterpenoid biosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00909 Sesquiterpenoid and triterpenoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00909 Sesquiterpenoid and triterpenoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00909 Sesquiterpenoid and triterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00061 Fatty acid biosynthesis 2
sly01040 Biosynthesis of unsaturated fatty acids 2
sly01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 5
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102631432 127898638 840266 822602 103849526 103849591 107903503 107903500 107903499 7454979 120577043 120580864 11426332 101264676 543549 102592011 142175522 107793666 107774988 4332831 103641097 103641099 123191554 123439124 8064774
The preparation time of this page was 1.5 [sec].