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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102614678   probable ATP-dependent DNA helicase CHR12 
 ath-u.5   ATCHR12   SNF2/Brahma-type chromatin-remodeling protein CHR12 
 ath-u.5   CHR23   homeotic protein regulator 
 gma-u.5   100796912   probable ATP-dependent DNA helicase CHR12 
 gma-u.5   100786280   probable ATP-dependent DNA helicase CHR12 
 gma-u.5   100775993   probable ATP-dependent DNA helicase CHR12 
 vvi-u.5   100264840   probable ATP-dependent DNA helicase CHR12 
 ppo-u.5   7493684   probable ATP-dependent DNA helicase CHR12 
 ppo-u.5   7474225   probable ATP-dependent DNA helicase CHR12 
 mtr-u.5   11444205   probable ATP-dependent DNA helicase CHR12 
 mtr-u.5   11414682   probable ATP-dependent DNA helicase CHR12 
 sly-u.5   101248711   SWI/SNF2-type chromatin remodelling ATPase 
 osa-u.5   4337784   probable ATP-dependent DNA helicase CHR719 
 zma-u.5   103647820   probable ATP-dependent DNA helicase CHR12 
 zma-u.5   100278915   uncharacterized LOC100278915 

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Top 50 coexpressed genes to 102614678 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102614678 (cit-r.1 coexpression data)

CoexMap"102614678"


citLOC102614678 | Entrez gene ID : 102614678    
Species cit ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu bdi sot tae bna ghi
Paralog 1 2 3 1 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (107 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (33 genes)  IEA  
GO:0042393 [list] [network] histone binding  (40 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1476 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
Protein XP_006489336.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_006489336.2)
Subcellular
localization
TargetP
other 8  (predict for XP_006489336.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102614678

.
ath-u.5
for
ATCHR12

.
ath-u.5
for
CHR23

.
gma-u.5
for
100796912

.
gma-u.5
for
100786280

.
gma-u.5
for
100775993

.
vvi-u.5
for
100264840

.
ppo-u.5
for
7493684

.
ppo-u.5
for
7474225

.
mtr-u.5
for
11444205

.
mtr-u.5
for
11414682

.
sly-u.5
for
101248711

.
osa-u.5
for
4337784

.
zma-u.5
for
103647820

.
zma-u.5
for
100278915

.


Ortholog ID: 8443
Species ath ath gma gma sly osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol CHR23 ATCHR12 LOC100775993 LOC100786280 LOC101248711 LOC4337784 LOC103647820 LOC100278915 LOC103849994 LOC100264840 LOC7474225 LOC7493684 LOC11414682 LOC11444205 LOC123191041 LOC123180412 LOC123424615 LOC107897690 LOC107914887 LOC106352779 LOC8069479 LOC102580079 LOC102614678 LOC100843552 LOC107761173 LOC107776074
Function* homeotic protein regulator SNF2/Brahma-type chromatin-remodeling protein CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 SWI/SNF2-type chromatin remodelling ATPase probable ATP-dependent DNA helicase CHR719 probable ATP-dependent DNA helicase CHR12 uncharacterized LOC100278915 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR719 probable ATP-dependent DNA helicase CHR719 probable ATP-dependent DNA helicase CHR719 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 probable ATP-dependent DNA helicase CHR12 putative ATP-dependent DNA helicase CHR12 putative ATP-dependent DNA helicase CHR12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03040 Spliceosome 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832051 819772 100775993 100786280 101248711 4337784 103647820 100278915 103849994 100264840 7474225 7493684 11414682 11444205 123191041 123180412 123424615 107897690 107914887 106352779 8069479 102580079 102614678 100843552 107761173 107776074
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