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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102615340   AMSH-like ubiquitin thioesterase 2 
 ath-u.5   AMSH2   associated molecule with the SH3 domain of STAM 2 
 bra-r.6   103871842   AMSH-like ubiquitin thioesterase 2 
 ghi-r.1   107909669   AMSH-like ubiquitin thioesterase 2 
 ghi-r.1   107886586   AMSH-like ubiquitin thioesterase 2 
 bna-r.1   106381015   AMSH-like ubiquitin thioesterase 2 
 bna-r.1   106357924   AMSH-like ubiquitin thioesterase 2 
 bna-r.1   125575362   AMSH-like ubiquitin thioesterase 3 
 gma-u.5   100807282   AMSH-like ubiquitin thioesterase 2 
 vvi-u.5   100852697   AMSH-like ubiquitin thioesterase 2 
 ppo-u.5   7492397   AMSH-like ubiquitin thioesterase 2 
 mtr-u.5   11406347   AMSH-like ubiquitin thioesterase 2 
 sot-r.1   102579319   AMSH-like ubiquitin thioesterase 2 
 nta-r.1   107813862   AMSH-like ubiquitin thioesterase 2 
 osa-u.5   4327852   AMSH-like ubiquitin thioesterase 2 
 zma-u.5   100191225   AMSH-like ubiquitin thioesterase 2 
 tae-r.2   123078721   AMSH-like ubiquitin thioesterase 2 
 tae-r.2   123070276   AMSH-like ubiquitin thioesterase 2 
 tae-r.2   123061650   AMSH-like ubiquitin thioesterase 2 
 hvu-r.1   123444022   AMSH-like ubiquitin thioesterase 2 
 sbi-r.1   110433847   AMSH-like ubiquitin thioesterase 2 
 bdi-r.1   100844070   AMSH-like ubiquitin thioesterase 2 
 cre-r.1   CHLRE_01g024300v5   uncharacterized protein 

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Top 50 coexpressed genes to 102615340 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102615340 (cit-r.1 coexpression data)

CoexMap"102615340"


citLOC102615340 | Entrez gene ID : 102615340    
Species cit ath bra ghi bna gma vvi ppo mtr sot nta osa zma tae hvu sbi bdi cre sly
Paralog 1 1 1 2 3 1 1 1 1 1 1 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit04144 [list] [network] Endocytosis (124 genes)
GO BP
GO:0070536 [list] [network] protein K63-linked deubiquitination  (3 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (146 genes)  IEA  
GO:0016020 [list] [network] membrane  (2752 genes)  IEA  
GO MF
GO:0140492 [list] [network] metal-dependent deubiquitinase activity  (3 genes)  IEA  
GO:0061578 [list] [network] K63-linked deubiquitinase activity  (4 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006483856.1 [sequence] [blastp]
XP_006483857.1 [sequence] [blastp]
XP_006483858.1 [sequence] [blastp]
XP_006483859.1 [sequence] [blastp]
XP_006483860.1 [sequence] [blastp]
XP_006483861.1 [sequence] [blastp]
XP_006483862.1 [sequence] [blastp]
XP_006483863.1 [sequence] [blastp]
XP_024957198.1 [sequence] [blastp]
XP_052295251.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 2  (predict for XP_006483856.1)
chlo 7,  cyto 2  (predict for XP_006483857.1)
chlo 7,  cyto 2  (predict for XP_006483858.1)
chlo 6,  cyto 2,  E.R. 1  (predict for XP_006483859.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  cysk 1  (predict for XP_006483860.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_006483861.1)
chlo 6,  mito 1,  cyto 1,  vacu 1,  E.R. 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_006483862.1)
chlo 6,  cyto 1,  mito 1,  extr 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_006483863.1)
chlo 7,  cyto 2  (predict for XP_024957198.1)
extr 3,  chlo 2,  cyto 1,  vacu 1,  chlo_mito 1  (predict for XP_052295251.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_006483856.1)
chlo 7  (predict for XP_006483857.1)
chlo 7  (predict for XP_006483858.1)
chlo 7  (predict for XP_006483859.1)
chlo 7  (predict for XP_006483860.1)
chlo 7  (predict for XP_006483861.1)
chlo 7  (predict for XP_006483862.1)
chlo 7  (predict for XP_006483863.1)
chlo 7  (predict for XP_024957198.1)
other 9  (predict for XP_052295251.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102615340
ath-u.5
for
AMSH2
bra-r.6
for
103871842
ghi-r.1
for
107909669
ghi-r.1
for
107886586
bna-r.1
for
106381015
bna-r.1
for
106357924
bna-r.1
for
125575362
gma-u.5
for
100807282
vvi-u.5
for
100852697
ppo-u.5
for
7492397
mtr-u.5
for
11406347
sot-r.1
for
102579319
nta-r.1
for
107813862
osa-u.5
for
4327852
zma-u.5
for
100191225
tae-r.2
for
123078721
tae-r.2
for
123070276
tae-r.2
for
123061650
hvu-r.1
for
123444022
sbi-r.1
for
110433847
bdi-r.1
for
100844070
cre-r.1
for
CHLRE_01g024300v5


Ortholog ID: 10445
Species cit ath bra ghi ghi bna bna bna gma vvi ppo mtr sot nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102615340 AMSH2 LOC103871842 LOC107909669 LOC107886586 LOC106381015 LOC106357924 LOC125575362 LOC100807282 LOC100852697 LOC7492397 LOC11406347 LOC102579319 LOC107813862 LOC4327852 LOC100191225 LOC123078721 LOC123070276 LOC123061650 LOC123444022 LOC110433847 LOC100844070 CHLRE_01g024300v5
Function* AMSH-like ubiquitin thioesterase 2 associated molecule with the SH3 domain of STAM 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03018 RNA degradation 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00310 Lysine degradation 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04075 Plant hormone signal transduction 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi00020 Citrate cycle (TCA cycle) 2
bdi01200 Carbon metabolism 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102615340 837603 103871842 107909669 107886586 106381015 106357924 125575362 100807282 100852697 7492397 11406347 102579319 107813862 4327852 100191225 123078721 123070276 123061650 123444022 110433847 100844070 5715257
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