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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102615372   isocitrate lyase 
 ath-u.5   ICL   isocitrate lyase 
 bra-r.6   103869151   isocitrate lyase 
 bra-r.6   103859922   isocitrate lyase 
 ghi-r.1   107920350   isocitrate lyase 
 ghi-r.1   107910095   isocitrate lyase-like 
 ghi-r.1   107893568   isocitrate lyase-like 
 bna-r.1   125579992   isocitrate lyase-like 
 bna-r.1   106389063   isocitrate lyase 
 bna-r.1   106439648   isocitrate lyase-like 
 gma-u.5   ICL1   isocitrate lyase 1-like 
 gma-u.5   ICL   isocitrate lyase 2 
 vvi-u.5   100248231   isocitrate lyase 
 sly-u.5   544276   isocitrate lyase 
 sot-r.1   102581970   isocitrate lyase 
 nta-r.1   107829652   isocitrate lyase-like 
 nta-r.1   107818961   isocitrate lyase 
 osa-u.5   4343441   isocitrate lyase-like 
 zma-u.5   103633249   isocitrate lyase 
 tae-r.2   123044645   isocitrate lyase 
 tae-r.2   123052517   isocitrate lyase 
 tae-r.2   100682407   isocitrate lyase 
 hvu-r.1   123429919   isocitrate lyase 
 sbi-r.1   8084064   isocitrate lyase 
 bdi-r.1   100841104   isocitrate lyase 
 cre-r.1   CHLRE_06g282800v5   uncharacterized protein 

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Top 50 coexpressed genes to 102615372 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102615372 (cit-r.1 coexpression data)

CoexMap"102615372"


citLOC102615372 | Entrez gene ID : 102615372      
Species cit ath bra ghi bna gma vvi sly sot nta osa zma tae hvu sbi bdi cre mtr ppo
Paralog 1 1 2 3 3 2 1 1 1 2 1 1 3 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00630 [list] [network] Glyoxylate and dicarboxylate metabolism (64 genes)
cit00640 [list] [network] Propanoate metabolism (37 genes)
cit01200 [list] [network] Carbon metabolism (231 genes)
GO BP
GO:0019752 [list] [network] carboxylic acid metabolic process  (479 genes)  IEA  
GO CC
GO:0009514 [list] [network] glyoxysome  (1 genes)  IEA  
GO MF
GO:0004451 [list] [network] isocitrate lyase activity  (1 genes)  IEA  
Protein XP_006469703.1 [sequence] [blastp]
XP_024950949.1 [sequence] [blastp]
Subcellular
localization
wolf
pero 7,  chlo 2  (predict for XP_006469703.1)
mito 6,  chlo_mito 5,  chlo 2  (predict for XP_024950949.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_006469703.1)
mito 8  (predict for XP_024950949.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102615372
ath-u.5
for
ICL
bra-r.6
for
103869151
bra-r.6
for
103859922
ghi-r.1
for
107920350
ghi-r.1
for
107910095
ghi-r.1
for
107893568
bna-r.1
for
125579992
bna-r.1
for
106389063
bna-r.1
for
106439648
gma-u.5
for
ICL1
gma-u.5
for
ICL
vvi-u.5
for
100248231
sly-u.5
for
544276
sot-r.1
for
102581970
nta-r.1
for
107829652
nta-r.1
for
107818961
osa-u.5
for
4343441
zma-u.5
for
103633249
tae-r.2
for
123044645
tae-r.2
for
123052517
tae-r.2
for
100682407
hvu-r.1
for
123429919
sbi-r.1
for
8084064
bdi-r.1
for
100841104
cre-r.1
for
CHLRE_06g282800v5


Ortholog ID: 6881
Species cit ath bra bra ghi ghi ghi bna bna bna gma gma vvi sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102615372 ICL LOC103869151 LOC103859922 LOC107910095 LOC107893568 LOC107887472 LOC125579992 LOC106389063 LOC106445986 ICL1 ICL LOC100248231 LOC544276 LOC102581970 LOC107829652 LOC107818961 LOC4343441 LOC103633249 LOC123044645 LOC123052517 LOC100682407 LOC123429919 LOC8084064 LOC100841104 CHLRE_06g282800v5
Function* isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase-like isocitrate lyase-like isocitrate lyase-like isocitrate lyase-like isocitrate lyase isocitrate lyase-like isocitrate lyase 1-like isocitrate lyase 2 isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase-like isocitrate lyase isocitrate lyase-like isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase isocitrate lyase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 3
cit00941 Flavonoid biosynthesis 2
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00640 Propanoate metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi01200 Carbon metabolism 6
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi01200 Carbon metabolism 6
ghi00640 Propanoate metabolism 4
ghi00500 Starch and sucrose metabolism 2
ghi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00640 Propanoate metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi01200 Carbon metabolism 6
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 3
bna00640 Propanoate metabolism 3
bna01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 3
bna00640 Propanoate metabolism 3
bna01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 3
bna00640 Propanoate metabolism 3
bna01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 4
gma01240 Biosynthesis of cofactors 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma01200 Carbon metabolism 3
gma00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 5
gma00620 Pyruvate metabolism 5
gma00010 Glycolysis / Gluconeogenesis 4
gma01200 Carbon metabolism 4
gma00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 5
sly01200 Carbon metabolism 5
sly00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot00630 Glyoxylate and dicarboxylate metabolism 5
sot00620 Pyruvate metabolism 3
sot00071 Fatty acid degradation 2
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01200 Carbon metabolism 4
nta00280 Valine, leucine and isoleucine degradation 2
nta00620 Pyruvate metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01200 Carbon metabolism 4
nta00280 Valine, leucine and isoleucine degradation 2
nta00620 Pyruvate metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 2
zma00640 Propanoate metabolism 2
zma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae01200 Carbon metabolism 6
tae00620 Pyruvate metabolism 3
tae00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae01200 Carbon metabolism 6
tae00620 Pyruvate metabolism 3
tae00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae01200 Carbon metabolism 6
tae00620 Pyruvate metabolism 3
tae00640 Propanoate metabolism 3
tae00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00460 Cyanoamino acid metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi00480 Glutathione metabolism 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre00620 Pyruvate metabolism 2
cre00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102615372 821726 103869151 103859922 107910095 107893568 107887472 125579992 106389063 106445986 100789036 100782793 100248231 544276 102581970 107829652 107818961 4343441 103633249 123044645 123052517 100682407 123429919 8084064 100841104 5720950
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