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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102615478   pentatricopeptide repeat-containing protein At1g77405 
 bra-r.6   103867333   pentatricopeptide repeat-containing protein At1g77405 
 ghi-r.1   121218259   pentatricopeptide repeat-containing protein At1g77405 
 ghi-r.1   107901387   pentatricopeptide repeat-containing protein At1g77405 
 gma-u.5   100784365   pentatricopeptide repeat-containing protein At1g77405 
 vvi-u.5   100261059   pentatricopeptide repeat-containing protein At1g77405 
 mtr-u.5   11429976   pentatricopeptide repeat-containing protein At1g77405 
 sly-u.5   101266052   pentatricopeptide repeat-containing protein At1g77405 
 sot-r.1   102598124   pentatricopeptide repeat-containing protein At1g77405-like 
 sot-r.1   102605091   pentatricopeptide repeat-containing protein At1g77405 
 sot-r.1   107059032   pentatricopeptide repeat-containing protein At1g77405-like 
 nta-r.1   107760688   pentatricopeptide repeat-containing protein At1g77405 
 nta-r.1   107783613   pentatricopeptide repeat-containing protein At1g77405-like 
 osa-u.5   4334028   pentatricopeptide repeat-containing protein At1g77405 
 zma-u.5   100383443   Pentatricopeptide repeat-containing protein 
 sbi-r.1   8085977   pentatricopeptide repeat-containing protein At1g77405 
 bdi-r.1   100837428   pentatricopeptide repeat-containing protein At1g77405 

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Top 50 coexpressed genes to 102615478 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102615478 (cit-r.1 coexpression data)

CoexMap"102615478"


citLOC102615478 | Entrez gene ID : 102615478      
Species cit bra ghi gma vvi mtr sly sot nta osa zma sbi bdi tae bna ppo cre ath hvu
Paralog 1 1 2 1 1 1 1 3 2 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052298817.1 [sequence] [blastp]
XP_052298818.1 [sequence] [blastp]
XP_052298819.1 [sequence] [blastp]
XP_052298820.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 3,  E.R. 1,  chlo_mito 1  (predict for XP_052298817.1)
extr 4,  chlo 3,  E.R. 1,  chlo_mito 1  (predict for XP_052298818.1)
extr 4,  chlo 3,  E.R. 1,  chlo_mito 1  (predict for XP_052298819.1)
extr 4,  chlo 3,  E.R. 1,  chlo_mito 1  (predict for XP_052298820.1)
Subcellular
localization
TargetP
other 2  (predict for XP_052298817.1)
other 2  (predict for XP_052298818.1)
other 2  (predict for XP_052298819.1)
other 2  (predict for XP_052298820.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102615478
bra-r.6
for
103867333
ghi-r.1
for
121218259
ghi-r.1
for
107901387
gma-u.5
for
100784365
vvi-u.5
for
100261059
mtr-u.5
for
11429976
sly-u.5
for
101266052
sot-r.1
for
102598124
sot-r.1
for
102605091
sot-r.1
for
107059032
nta-r.1
for
107760688
nta-r.1
for
107783613
osa-u.5
for
4334028
zma-u.5
for
100383443
sbi-r.1
for
8085977
bdi-r.1
for
100837428


Ortholog ID: 7097
Species cit bra ghi ghi bna gma vvi mtr sly sot sot sot nta nta osa zma sbi bdi
Symbol LOC102615478 LOC103867333 LOC121218259 LOC107901387 LOC106432395 LOC100784365 LOC100261059 LOC11429976 LOC101266052 LOC102598124 LOC102605091 LOC107059032 LOC107760688 LOC107783613 LOC4334028 LOC100383443 LOC8085977 LOC100837428
Function* pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405-like pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405-like pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405-like pentatricopeptide repeat-containing protein At1g77405 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g77405 pentatricopeptide repeat-containing protein At1g77405
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102615478 103867333 121218259 107901387 106432395 100784365 100261059 11429976 101266052 102598124 102605091 107059032 107760688 107783613 4334028 100383443 8085977 100837428
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