ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102616429	endoglucanase 2-like
cit-r.1	102624020	endoglucanase 11-like
ath-u.5	GH9B7	glycosyl hydrolase 9B7
ath-u.5	GH9C1	glycosyl hydrolase 9C1
ath-u.5	GH9B13	glycosyl hydrolase 9B13
bra-r.6	103866811	endoglucanase 12-like
bra-r.6	103872802	endoglucanase 2
ghi-r.1	107912634	endoglucanase 11
ghi-r.1	107913530	endoglucanase 24
bna-r.1	111215587	endoglucanase 11-like
bna-r.1	106405801	endoglucanase 10
bna-r.1	106409563	endoglucanase 2
gma-u.5	100788283	endoglucanase 9
gma-u.5	100799911	endoglucanase 24
gma-u.5	CEL8	endo-1,4-beta-glucanase
vvi-u.5	100232904	endoglucanase 17
vvi-u.5	100232903	endoglucanase 1
ppo-u.5	7472710	endoglucanase 6
ppo-u.5	7472742	endoglucanase
ppo-u.5	7476746	endoglucanase 4
mtr-u.5	11438939	endoglucanase 1
sly-u.5	Cel1	endo-1,4-beta-glucanase
sly-u.5	Cel8	endo-beta-1,4-D-glucanase
sly-u.5	cellulase	endo-1,4-beta-glucanase precursor
sot-r.1	102589512	endoglucanase 6-like
sot-r.1	102592181	endoglucanase 8-like
sot-r.1	102597198	endoglucanase 11-like
nta-r.1	107803045	endoglucanase 11
nta-r.1	107803827	endoglucanase 18-like
nta-r.1	107804089	endoglucanase 11-like
osa-u.5	4337384	endoglucanase 13-like
osa-u.5	4330637	endoglucanase 6-like
zma-u.5	103654079	endoglucanase 7-like
zma-u.5	100216867	uncharacterized LOC100216867
zma-u.5	100192969	endoglucanase 1
tae-r.2	123110047	endoglucanase 14
tae-r.2	123041429	endoglucanase 11-like
sbi-r.1	8066095	endoglucanase 19
bdi-r.1	100830954	endoglucanase 7
bdi-r.1	100830407	endoglucanase 15
cre-r.1	CHLRE_06g270500v5	uncharacterized protein
cre-r.1	CHLRE_17g730600v5	uncharacterized protein
cre-r.1	CHLRE_17g730550v5	uncharacterized protein

Top 50 coexpressed genes to 102616429 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102616429 (cit-r.1 coexpression data)

CoexMap"102616429"

[Cytoscape]

Annotation

functional annotation

KEGG

cit00500 [list] [network] Starch and sucrose metabolism (144 genes)

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(640 genes)

IEA

GO CC

GO MF

GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds

(362 genes)

IEA

Protein

XP_006466419.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, E.R. 3, plas 1, nucl 1, cyto 1, mito 1, vacu 1, cyto_nucl 1, golg_plas 1, cysk_plas 1

(predict for XP_006466419.2)

Subcellular
localization
TargetP

other 9

(predict for XP_006466419.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102616429	cit-r.1 for 102624020	ath-u.5 for GH9B7	ath-u.5 for GH9C1	ath-u.5 for GH9B13	bra-r.6 for 103866811	bra-r.6 for 103872802	ghi-r.1 for 107912634	ghi-r.1 for 107913530	bna-r.1 for 111215587	bna-r.1 for 106405801	bna-r.1 for 106409563	gma-u.5 for 100788283	gma-u.5 for 100799911	gma-u.5 for CEL8	vvi-u.5 for 100232904	vvi-u.5 for 100232903	ppo-u.5 for 7472710	ppo-u.5 for 7472742	ppo-u.5 for 7476746	mtr-u.5 for 11438939	sly-u.5 for Cel1	sly-u.5 for Cel8	sly-u.5 for cellulase	sot-r.1 for 102589512	sot-r.1 for 102592181	sot-r.1 for 102597198	nta-r.1 for 107803045	nta-r.1 for 107803827	nta-r.1 for 107804089	osa-u.5 for 4337384	osa-u.5 for 4330637	zma-u.5 for 103654079	zma-u.5 for 100216867	zma-u.5 for 100192969	tae-r.2 for 123110047	tae-r.2 for 123041429	sbi-r.1 for 8066095	bdi-r.1 for 100830954	bdi-r.1 for 100830407	cre-r.1 for CHLRE_06g270500v5	cre-r.1 for CHLRE_17g730600v5	cre-r.1 for CHLRE_17g730550v5

Ortholog

Ortholog ID: 20

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

zma

tae

hvu

sbi

bdi

cre

Symbol

GH9B15

cel5

Function^*

endoglucanase 11-like

glycosyl hydrolase 9B15

endoglucanase 2

endoglucanase 8

endoglucanase 8-like

endoglucanase 10

endoglucanase 5

endoglucanase 4

endoglucanase 8

endoglucanase

endoglucanase 9

endoglucanase 8

endoglucanase 17

endoglucanase 11

endoglucanase 2

endo-1,4-beta-glucanase

endoglucanase 24-like

endoglucanase 1

endoglucanase 17

endoglucanase 5

endoglucanase 17

endoglucanase 1-like

endoglucanase 2-like

uncharacterized LOC100216867

endoglucanase 16-like

uncharacterized LOC100274182

endoglucanase 14

endoglucanase 7-like

endoglucanase 19

endoglucanase 17

endoglucanase 16

endoglucanase 17

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00460	Cyanoamino acid metabolism	2
ath00500	Starch and sucrose metabolism	2
ath00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	6
bna02010	ABC transporters	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	3
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	3
mtr01250	Biosynthesis of nucleotide sugars	3
mtr00040	Pentose and glucuronate interconversions	2
mtr00053	Ascorbate and aldarate metabolism	2
mtr00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	3
sly00051	Fructose and mannose metabolism	2
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	6
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	4
nta00670	One carbon pool by folate	4
nta00999	Biosynthesis of various plant secondary metabolites	4
nta01230	Biosynthesis of amino acids	4
nta01240	Biosynthesis of cofactors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4
tae00220	Arginine biosynthesis	3
tae01210	2-Oxocarboxylic acid metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

102624020

828456

103872802

103831605

107909898

107920906

107944708

106381056

106399750

100804372

100255237

18108417

7457792

11410209

11442200

11439887

543560

101245995

101247302

102605343

102605883

107788548

107769637

107775257

100216867

103637788

100274182

123180291

123404320

8066095

8061520

8061500

100844035

5727057

5727089

5721799

The preparation time of this page was 0.2 [sec].


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	sbi	bdi	cre	hvu
Paralog	2	3	2	2	3	3	2	3	1	3	3	3	2	3	2	1	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102616429 (cit-r.1 coexpression data)

Top 50 enrichment test to 102616429 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**