ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102616658	uncharacterized LOC102616658
ath-u.5	AT5G27760	Hypoxia-responsive family protein
bra-r.6	103854672	uncharacterized LOC103854672
bra-r.6	103874513	uncharacterized LOC103874513
ghi-r.1	107946025	uncharacterized LOC107946025
ghi-r.1	107927303	uncharacterized LOC107927303
bna-r.1	125600796	uncharacterized LOC125600796
bna-r.1	125580812	uncharacterized LOC125580812
bna-r.1	BNAA06G28580D	uncharacterized BNAA06G28580D
gma-u.5	100809814	uncharacterized LOC100809814
gma-u.5	100500345	uncharacterized LOC100500345
gma-u.5	100789542	uncharacterized LOC100789542
vvi-u.5	100243044	uncharacterized LOC100243044
vvi-u.5	100244157	uncharacterized LOC100244157
ppo-u.5	7481726	uncharacterized LOC7481726
ppo-u.5	18098658	uncharacterized LOC18098658
mtr-u.5	11410770	uncharacterized LOC11410770
mtr-u.5	11418005	uncharacterized LOC11418005
sly-u.5	101256324	uncharacterized LOC101256324
sly-u.5	101257510	uncharacterized LOC101257510
sot-r.1	102585010	uncharacterized LOC102585010
nta-r.1	107814462	uncharacterized LOC107814462
nta-r.1	107828678	uncharacterized LOC107828678
osa-u.5	9269768	uncharacterized LOC9269768
osa-u.5	4351298	uncharacterized LOC4351298
osa-u.5	4344259	uncharacterized LOC4344259
zma-u.5	118476738	uncharacterized LOC118476738
zma-u.5	100285999	uncharacterized LOC100285999
zma-u.5	100281627	uncharacterized LOC100281627
tae-r.2	123046566	uncharacterized LOC123046566
tae-r.2	123043730	uncharacterized LOC123043730
tae-r.2	123054425	uncharacterized LOC123054425
hvu-r.1	123427739	uncharacterized LOC123427739
hvu-r.1	123395005	uncharacterized LOC123395005
hvu-r.1	123429468	uncharacterized LOC123429468
sbi-r.1	8080002	uncharacterized LOC8080002
sbi-r.1	8079994	uncharacterized LOC8079994
sbi-r.1	8055442	uncharacterized LOC8055442
bdi-r.1	100831904	uncharacterized LOC100831904

Top 50 coexpressed genes to 102616658 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102616658 (cit-r.1 coexpression data)

CoexMap"102616658"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0033617 [list] [network] mitochondrial respiratory chain complex IV assembly

(7 genes)

IEA

GO CC

GO:0005743 [list] [network] mitochondrial inner membrane

(83 genes)

IEA

GO MF

Protein

XP_006472103.2 [sequence] [blastp]

Subcellular
localization
wolf

mito 3, cyto 2, chlo_mito 2, nucl 1, nucl_plas 1

(predict for XP_006472103.2)

Subcellular
localization
TargetP

other 3

(predict for XP_006472103.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102616658	ath-u.5 for AT5G27760	bra-r.6 for 103854672	bra-r.6 for 103874513	ghi-r.1 for 107946025	ghi-r.1 for 107927303	bna-r.1 for 125600796	bna-r.1 for 125580812	bna-r.1 for BNAA06G28580D	gma-u.5 for 100809814	gma-u.5 for 100500345	gma-u.5 for 100789542	vvi-u.5 for 100243044	vvi-u.5 for 100244157	ppo-u.5 for 7481726	ppo-u.5 for 18098658	mtr-u.5 for 11410770	mtr-u.5 for 11418005	sly-u.5 for 101256324	sly-u.5 for 101257510	sot-r.1 for 102585010	nta-r.1 for 107814462	nta-r.1 for 107828678	osa-u.5 for 9269768	osa-u.5 for 4351298	osa-u.5 for 4344259	zma-u.5 for 118476738	zma-u.5 for 100285999	zma-u.5 for 100281627	tae-r.2 for 123046566	tae-r.2 for 123043730	tae-r.2 for 123054425	hvu-r.1 for 123427739	hvu-r.1 for 123395005	hvu-r.1 for 123429468	sbi-r.1 for 8080002	sbi-r.1 for 8079994	sbi-r.1 for 8055442	bdi-r.1 for 100831904

Ortholog

Ortholog ID: 2463

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102616658

Hypoxia-responsive family protein

uncharacterized LOC103854672

uncharacterized LOC103874513

uncharacterized LOC107946025

uncharacterized LOC107927303

uncharacterized LOC107893285

uncharacterized LOC125600796

uncharacterized LOC125580812

uncharacterized BNAA06G28580D

uncharacterized LOC100809814

uncharacterized LOC100500345

uncharacterized LOC100789542

uncharacterized LOC100243044

uncharacterized LOC100244157

uncharacterized LOC7481726

uncharacterized LOC18098658

uncharacterized LOC11410770

uncharacterized LOC11418005

uncharacterized LOC101256324

uncharacterized LOC101257510

uncharacterized LOC102585010

uncharacterized LOC107814462

uncharacterized LOC107828678

uncharacterized LOC9269768

uncharacterized LOC4351298

uncharacterized LOC4329836

uncharacterized LOC100285999

uncharacterized LOC100281627

Hypoxia-responsive family protein

uncharacterized LOC123051587

uncharacterized LOC123187523

uncharacterized LOC123190308

uncharacterized LOC123427739

uncharacterized LOC123395005

uncharacterized LOC123429468

uncharacterized LOC8080002

uncharacterized LOC8079994

uncharacterized LOC8055442

uncharacterized LOC100831904

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	3
cit04146	Peroxisome	2
cit01240	Biosynthesis of cofactors	2
cit00010	Glycolysis / Gluconeogenesis	2
cit00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	10
bra01230	Biosynthesis of amino acids	10
bra00710	Carbon fixation by Calvin cycle	7
bra00010	Glycolysis / Gluconeogenesis	5
bra01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra01240	Biosynthesis of cofactors	2
bra00020	Citrate cycle (TCA cycle)	2
bra00310	Lysine degradation	2
bra00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	4
ghi00071	Fatty acid degradation	3
ghi00350	Tyrosine metabolism	3
ghi00592	alpha-Linolenic acid metabolism	3
ghi00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	4
ghi00071	Fatty acid degradation	3
ghi00350	Tyrosine metabolism	3
ghi00592	alpha-Linolenic acid metabolism	3
ghi00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	6
bna01232	Nucleotide metabolism	6
bna00040	Pentose and glucuronate interconversions	4
bna00053	Ascorbate and aldarate metabolism	4
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2
gma00010	Glycolysis / Gluconeogenesis	2
gma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	8
gma00071	Fatty acid degradation	3
gma00350	Tyrosine metabolism	3
gma00592	alpha-Linolenic acid metabolism	3
gma00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	4
vvi01200	Carbon metabolism	4
vvi01230	Biosynthesis of amino acids	4
vvi00330	Arginine and proline metabolism	3
vvi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	5
ppo00010	Glycolysis / Gluconeogenesis	4
ppo01230	Biosynthesis of amino acids	3
ppo00330	Arginine and proline metabolism	2
ppo00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	6
mtr00620	Pyruvate metabolism	4
mtr00071	Fatty acid degradation	3
mtr00350	Tyrosine metabolism	3
mtr00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	4
mtr00071	Fatty acid degradation	3
mtr00350	Tyrosine metabolism	3
mtr00592	alpha-Linolenic acid metabolism	3
mtr00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	5
sly04016	MAPK signaling pathway - plant	2
sly04070	Phosphatidylinositol signaling system	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00020	Citrate cycle (TCA cycle)	4
nta00785	Lipoic acid metabolism	4
nta01200	Carbon metabolism	4
nta01210	2-Oxocarboxylic acid metabolism	4
nta00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00020	Citrate cycle (TCA cycle)	5
osa01200	Carbon metabolism	5
osa01210	2-Oxocarboxylic acid metabolism	5
osa01230	Biosynthesis of amino acids	3
osa00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	9
zma00010	Glycolysis / Gluconeogenesis	7
zma01230	Biosynthesis of amino acids	5
zma00500	Starch and sucrose metabolism	4
zma00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	5
tae00071	Fatty acid degradation	5
tae00350	Tyrosine metabolism	5
tae00592	alpha-Linolenic acid metabolism	5
tae00620	Pyruvate metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	4
tae00071	Fatty acid degradation	4
tae00350	Tyrosine metabolism	4
tae00592	alpha-Linolenic acid metabolism	4
tae00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae01200	Carbon metabolism	3
tae01230	Biosynthesis of amino acids	3
tae03018	RNA degradation	3
tae04820	Cytoskeleton in muscle cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	4
hvu04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	2
sbi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	3
sbi00562	Inositol phosphate metabolism	2
sbi00270	Cysteine and methionine metabolism	2
sbi00620	Pyruvate metabolism	2
sbi00640	Propanoate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

102616658

832838

103854672

103874513

107946025

107927303

107893285

125600796

125580812

106407476

100809814

100500345

100789542

100243044

100244157

7481726

18098658

11410770

11418005

101256324

101257510

102585010

107814462

107828678

9269768

4351298

4329836

100285999

100281627

100276769

123051587

123187523

123190308

123427739

123395005

123429468

8080002

8079994

8055442

100831904

The preparation time of this page was 0.2 [sec].


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	2	2	3	3	2	2	2	2	1	2	3	3	3	3	3	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102616658 (cit-r.1 coexpression data)

Top 50 enrichment test to 102616658 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**