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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102617250   uncharacterized LOC102617250 
 ath-u.5   AT5G52950   LIM domain protein 
 gma-u.5   102660949   uncharacterized LOC102660949 
 vvi-u.5   100243267   uncharacterized LOC100243267 
 ppo-u.5   7489799   uncharacterized LOC7489799 
 mtr-u.5   11416493   uncharacterized LOC11416493 
 sly-u.5   101257240   uncharacterized LOC101257240 
 osa-u.5   4326698   uncharacterized LOC4326698 
 zma-u.5   100277819   uncharacterized LOC100277819 

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Top 50 coexpressed genes to 102617250 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102617250 (cit-r.1 coexpression data)

CoexMap"102617250"


citLOC102617250 | Entrez gene ID : 102617250    
Species cit ath gma vvi ppo mtr sly osa zma nta bna tae bdi sot bra sbi hvu cre ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030174 [list] [network] regulation of DNA-templated DNA replication initiation  (3 genes)  IEA  
GO:0007095 [list] [network] mitotic G2 DNA damage checkpoint signaling  (5 genes)  IEA  
GO:0010212 [list] [network] response to ionizing radiation  (6 genes)  IEA  
GO:0033314 [list] [network] mitotic DNA replication checkpoint signaling  (12 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (109 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (116 genes)  IEA  
Protein XP_006490593.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  nucl 3,  cyto 1,  cysk_nucl 1  (predict for XP_006490593.2)
Subcellular
localization
TargetP
other 6  (predict for XP_006490593.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102617250

.
ath-u.5
for
AT5G52950

.
gma-u.5
for
102660949

.
vvi-u.5
for
100243267

.
ppo-u.5
for
7489799

.
mtr-u.5
for
11416493

.
sly-u.5
for
101257240

.
osa-u.5
for
4326698

.
zma-u.5
for
100277819

.


Ortholog ID: 10389
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G52950 LOC102660949 LOC101257240 LOC4326698 LOC100277819 LOC103849111 LOC103846087 LOC100243267 LOC7489799 LOC11416493 LOC123069283 LOC123077807 LOC123443195 LOC107930162 LOC107890755 LOC111202883 LOC111213403 LOC8079485 LOC102606074 LOC102617250 LOC100832538 LOC107760626 LOC107770621
Function* LIM domain protein uncharacterized LOC102660949 uncharacterized LOC101257240 uncharacterized LOC4326698 uncharacterized LOC100277819 uncharacterized LOC103849111 uncharacterized LOC103846087 uncharacterized LOC100243267 uncharacterized LOC7489799 uncharacterized LOC11416493 uncharacterized LOC123069283 uncharacterized LOC123077807 uncharacterized LOC123443195 uncharacterized LOC107930162 uncharacterized LOC107890755 uncharacterized LOC111202883 uncharacterized LOC111213403 uncharacterized LOC8079485 uncharacterized LOC102606074 uncharacterized LOC102617250 uncharacterized LOC100832538 uncharacterized LOC107760626 uncharacterized LOC107770621
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly03460 Fanconi anemia pathway 3
sly00240 Pyrimidine metabolism 2
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 5
zma03440 Homologous recombination 3
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03460 Fanconi anemia pathway 3
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 3
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 13
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
tae00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835372 102660949 101257240 4326698 100277819 103849111 103846087 100243267 7489799 11416493 123069283 123077807 123443195 107930162 107890755 111202883 111213403 8079485 102606074 102617250 100832538 107760626 107770621
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