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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102617436   splicing factor SF3a60 homolog 
 ath-u.5   ATO   splicing factor-like protein 
 bra-r.6   103855659   splicing factor SF3a60 homolog 
 bra-r.6   103850610   splicing factor SF3a60 homolog 
 ghi-r.1   107930276   splicing factor SF3a60 homolog 
 ghi-r.1   107913690   splicing factor SF3a60 homolog 
 ghi-r.1   107891758   splicing factor SF3a60 homolog 
 bna-r.1   125581485   splicing factor SF3a60 homolog 
 bna-r.1   106427709   splicing factor SF3a60 homolog 
 bna-r.1   106422783   splicing factor SF3a60 homolog 
 gma-u.5   100820038   splicing factor SF3a60 homolog 
 gma-u.5   100815393   splicing factor SF3a60 homolog 
 vvi-u.5   100253705   splicing factor SF3a60 homolog 
 ppo-u.5   7453827   splicing factor SF3a60 homolog 
 ppo-u.5   7489842   splicing factor SF3a60 homolog 
 mtr-u.5   11418483   splicing factor SF3a60 homolog 
 sly-u.5   101254575   splicing factor SF3a60 homolog 
 sot-r.1   102580192   splicing factor 3A subunit 3 
 nta-r.1   107765278   splicing factor SF3a60 homolog 
 nta-r.1   107796993   splicing factor SF3a60 homolog 
 osa-u.5   4333915   splicing factor SF3a60 homolog 
 zma-u.5   100217051   Splicing factor SF3a60-like protein 
 tae-r.2   123147659   splicing factor SF3a60 homolog 
 tae-r.2   123061862   splicing factor SF3a60 homolog 
 tae-r.2   123070555   splicing factor SF3a60 homolog 
 hvu-r.1   123444123   splicing factor SF3a60 homolog 
 sbi-r.1   8068027   splicing factor SF3a60 homolog 
 sbi-r.1   8057452   splicing factor SF3a60 homolog 
 bdi-r.1   100837688   splicing factor SF3a60 homolog 
 cre-r.1   CHLRE_06g297750v5   uncharacterized protein 

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Top 50 coexpressed genes to 102617436 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102617436 (cit-r.1 coexpression data)

CoexMap"102617436"


citLOC102617436 | Entrez gene ID : 102617436      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 3 3 2 1 2 1 1 1 2 1 1 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03040 [list] [network] Spliceosome (220 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (155 genes)  IEA  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (138 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_006490497.1 [sequence] [blastp]
XP_015389573.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_006490497.1)
cyto 6,  nucl 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_015389573.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006490497.1)
other 7  (predict for XP_015389573.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102617436
ath-u.5
for
ATO
bra-r.6
for
103855659
bra-r.6
for
103850610
ghi-r.1
for
107930276
ghi-r.1
for
107913690
ghi-r.1
for
107891758
bna-r.1
for
125581485
bna-r.1
for
106427709
bna-r.1
for
106422783
gma-u.5
for
100820038
gma-u.5
for
100815393
vvi-u.5
for
100253705
ppo-u.5
for
7453827
ppo-u.5
for
7489842
mtr-u.5
for
11418483
sly-u.5
for
101254575
sot-r.1
for
102580192
nta-r.1
for
107765278
nta-r.1
for
107796993
osa-u.5
for
4333915
zma-u.5
for
100217051
tae-r.2
for
123147659
tae-r.2
for
123061862
tae-r.2
for
123070555
hvu-r.1
for
123444123
sbi-r.1
for
8068027
sbi-r.1
for
8057452
bdi-r.1
for
100837688
cre-r.1
for
CHLRE_06g297750v5


Ortholog ID: 6641
Species cit ath bra bra ghi ghi ghi bna bna bna gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC102617436 ATO LOC103855659 LOC103850610 LOC107930276 LOC107891758 LOC107890768 LOC125581485 LOC106427709 LOC106422783 LOC100820038 LOC100815393 LOC100253705 LOC7453827 LOC7489842 LOC11418483 LOC101254575 LOC102580192 LOC107765278 LOC107796993 LOC4333915 LOC100217051 LOC123061862 LOC123070555 LOC123078965 LOC123444123 LOC8068027 LOC8057452 LOC100837688 CHLRE_06g297750v5
Function* splicing factor SF3a60 homolog splicing factor-like protein splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor 3A subunit 3 splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog Splicing factor SF3a60-like protein splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog splicing factor SF3a60 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03022 Basal transcription factors 3
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03022 Basal transcription factors 3
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03022 Basal transcription factors 3
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 10
tae03050 Proteasome 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 12
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
tae03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 11
tae03050 Proteasome 6
tae03013 Nucleocytoplasmic transport 6
tae03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu04120 Ubiquitin mediated proteolysis 3
hvu03083 Polycomb repressive complex 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
sbi01230 Biosynthesis of amino acids 2
sbi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102617436 830503 103855659 103850610 107930276 107891758 107890768 125581485 106427709 106422783 100820038 100815393 100253705 7453827 7489842 11418483 101254575 102580192 107765278 107796993 4333915 100217051 123061862 123070555 123078965 123444123 8068027 8057452 100837688 5717031
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