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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102617868   pentatricopeptide repeat-containing protein At2g30780 
 ath-u.5   AT2G30780   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT2G48000   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103865071   pentatricopeptide repeat-containing protein At2g30780 
 ghi-r.1   107952199   pentatricopeptide repeat-containing protein At2g30780 
 ghi-r.1   107913146   pentatricopeptide repeat-containing protein At2g30780 
 bna-r.1   106426381   pentatricopeptide repeat-containing protein At2g30780 
 bna-r.1   106348378   pentatricopeptide repeat-containing protein At2g30780 
 gma-u.5   100816768   pentatricopeptide repeat-containing protein At2g30780 
 gma-u.5   100792116   pentatricopeptide repeat-containing protein At2g30780 
 vvi-u.5   100256237   pentatricopeptide repeat-containing protein At2g30780 
 ppo-u.5   7460365   pentatricopeptide repeat-containing protein At2g30780 
 mtr-u.5   11418299   pentatricopeptide repeat-containing protein At2g30780 
 mtr-u.5   11436413   pentatricopeptide repeat-containing protein At2g30780 
 sly-u.5   101266044   pentatricopeptide repeat-containing protein At2g30780 
 sot-r.1   102601662   pentatricopeptide repeat-containing protein At2g30780 
 nta-r.1   107778650   pentatricopeptide repeat-containing protein At2g30780 
 nta-r.1   107817545   pentatricopeptide repeat-containing protein At2g30780 
 osa-u.5   4338765   pentatricopeptide repeat-containing protein At2g30780-like 
 zma-u.5   103630349   pentatricopeptide repeat-containing protein At2g30780 
 hvu-r.1   123441379   pentatricopeptide repeat-containing protein At2g30780-like 
 sbi-r.1   8076944   pentatricopeptide repeat-containing protein At2g30780 
 bdi-r.1   100843861   pentatricopeptide repeat-containing protein At2g30780 

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Top 50 coexpressed genes to 102617868 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102617868 (cit-r.1 coexpression data)

CoexMap"102617868"


citLOC102617868 | Entrez gene ID : 102617868      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi cre tae
Paralog 1 2 1 2 2 2 1 1 2 1 1 2 1 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (227 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006479827.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_nucl 3  (predict for XP_006479827.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_006479827.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102617868
ath-u.5
for
AT2G30780
ath-u.5
for
AT2G48000
bra-r.6
for
103865071
ghi-r.1
for
107952199
ghi-r.1
for
107913146
bna-r.1
for
106426381
bna-r.1
for
106348378
gma-u.5
for
100816768
gma-u.5
for
100792116
vvi-u.5
for
100256237
ppo-u.5
for
7460365
mtr-u.5
for
11418299
mtr-u.5
for
11436413
sly-u.5
for
101266044
sot-r.1
for
102601662
nta-r.1
for
107778650
nta-r.1
for
107817545
osa-u.5
for
4338765
zma-u.5
for
103630349
hvu-r.1
for
123441379
sbi-r.1
for
8076944
bdi-r.1
for
100843861


Ortholog ID: 10685
Species cit ath ath bra ghi ghi bna bna gma gma vvi ppo mtr mtr sly sot nta nta osa zma hvu sbi bdi
Symbol LOC102617868 AT2G30780 AT2G48000 LOC103865071 LOC107952199 LOC107913146 LOC106426381 LOC106348378 LOC100816768 LOC100792116 LOC100256237 LOC7460365 LOC11418299 LOC11436413 LOC101266044 LOC102601662 LOC107778650 LOC107817545 LOC4338765 LOC103630349 LOC123441379 LOC8076944 LOC100843861
Function* pentatricopeptide repeat-containing protein At2g30780 Tetratricopeptide repeat (TPR)-like superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780-like pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780-like pentatricopeptide repeat-containing protein At2g30780 pentatricopeptide repeat-containing protein At2g30780
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00620 Pyruvate metabolism 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03018 RNA degradation 2
nta00780 Biotin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03018 RNA degradation 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102617868 817629 819412 103865071 107952199 107913146 106426381 106348378 100816768 100792116 100256237 7460365 11418299 11436413 101266044 102601662 107778650 107817545 4338765 103630349 123441379 8076944 100843861
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