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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SPCH   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103852045   transcription factor SPEECHLESS 
 bra-r.6   103844802   transcription factor SPEECHLESS 
 ghi-r.1   107947261   transcription factor SPEECHLESS 
 ghi-r.1   107942308   transcription factor SPEECHLESS 
 gma-u.5   SPCH1   transcription factor SPEECHLESS 
 gma-u.5   SPCH2   transcription factor SPEECHLESS-like 
 sly-u.5   101256653   transcription factor SPEECHLESS 
 nta-r.1   107765572   transcription factor SPEECHLESS-like 
 nta-r.1   107784398   transcription factor SPEECHLESS-like 

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Top 50 coexpressed genes to SPCH (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SPCH (ath-u.5 coexpression data)

CoexMap"102617919"


citLOC102617919 | Entrez gene ID : 102617919    
Species ath bra ghi gma sly nta tae zma bdi vvi osa ppo bna sot cit sbi hvu mtr cre
Paralog 1 2 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit04016 [list] [network] MAPK signaling pathway - plant (127 genes)
GO BP
GO:0010052 [list] [network] guard cell differentiation  (12 genes)  IEA  
GO:0010374 [list] [network] stomatal complex development  (12 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (192 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (408 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (825 genes)  IEA  
Protein XP_006490681.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cysk 1,  extr 1,  golg 1,  cysk_plas 1  (predict for XP_006490681.2)
Subcellular
localization
TargetP
other 9  (predict for XP_006490681.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
SPCH
bra-r.6
for
103852045
bra-r.6
for
103844802
ghi-r.1
for
107947261
ghi-r.1
for
107942308
gma-u.5
for
SPCH1
gma-u.5
for
SPCH2
sly-u.5
for
101256653
nta-r.1
for
107765572
nta-r.1
for
107784398


Ortholog ID: 5184
Species ath bra bra ghi ghi gma gma sly nta nta
Symbol SPCH LOC103852045 LOC103844802 LOC107947261 LOC107942308 SPCH1 SPCH2 LOC101256653 LOC107765572 LOC107784398
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS-like transcription factor SPEECHLESS transcription factor SPEECHLESS-like transcription factor SPEECHLESS-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 3
gma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835402 103852045 103844802 107947261 107942308 100777437 100808130 101256653 107765572 107784398
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