ATTED-II : GeneCoexpression result

Species	Gene	Description
cit-r.1	102618544	agamous-like MADS-box protein MADS2
ath-u.5	AGL31	AGAMOUS-like 31
ath-u.5	MAF3	K-box region and MADS-box transcription factor family protein
bra-r.6	103850339	MADS-box protein FLOWERING LOCUS C
bra-r.6	103855272	agamous-like MADS-box protein AGL27
bra-r.6	103855273	protein MADS AFFECTING FLOWERING 5
gma-u.5	AGL3L	agamous-like MADS-box protein AGL3-like
gma-u.5	100804540	MADS-box protein FLOWERING LOCUS C
vvi-u.5	FLC	flowering locus C
vvi-u.5	100241171	MADS-box transcription factor 18
ppo-u.5	18097112	MADS-box transcription factor 14
ppo-u.5	7456243	truncated transcription factor CAULIFLOWER A
sly-u.5	101250404	agamous-like MADS-box protein AGL27
sly-u.5	101247413	MADS-box transcription factor
sly-u.5	MBP15	MADS-box transcription factor MBP15
sot-r.1	102605245	protein MADS AFFECTING FLOWERING 5-like
sot-r.1	102593535	agamous-like MADS-box protein AGL27
nta-r.1	107764452	agamous-like MADS-box protein AGL27
nta-r.1	107761984	agamous-like MADS-box protein AGL27
nta-r.1	107830078	agamous-like MADS-box protein AGL27

Annotation

functional annotation

KEGG

GO BP

GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II

(107 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(2569 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(175 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(219 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(408 genes)	IEA

Protein

XP_024956851.1 [sequence] [blastp]
XP_024956852.1 [sequence] [blastp]
XP_052295749.1 [sequence] [blastp]
XP_052295750.1 [sequence] [blastp]
XP_052295751.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 4, chlo_mito 4	(predict for XP_024956851.1)
chlo 5, nucl 2, mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_024956852.1)
chlo 4, nucl 2, mito 2, plas 1, cysk 1, cysk_plas 1	(predict for XP_052295749.1)
chlo 6, nucl 2, mito 1, cysk_nucl 1	(predict for XP_052295750.1)
chlo 6, nucl 2, mito 1, cysk 1	(predict for XP_052295751.1)

Subcellular
localization
TargetP

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102618544	ath-u.5 for AGL31	ath-u.5 for MAF3	bra-r.6 for 103850339	bra-r.6 for 103855272	bra-r.6 for 103855273	gma-u.5 for AGL3L	gma-u.5 for 100804540	vvi-u.5 for FLC	vvi-u.5 for 100241171	ppo-u.5 for 18097112	ppo-u.5 for 7456243	sly-u.5 for 101250404	sly-u.5 for 101247413	sly-u.5 for MBP15	sot-r.1 for 102605245	sot-r.1 for 102593535	nta-r.1 for 107764452	nta-r.1 for 107761984	nta-r.1 for 107830078