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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102618705   putative pentatricopeptide repeat-containing protein At1g74580 
 ath-u.5   AT1G74580   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100811379   putative pentatricopeptide repeat-containing protein At1g74580 
 vvi-u.5   100253631   putative pentatricopeptide repeat-containing protein At1g74580 
 ppo-u.5   7477189   putative pentatricopeptide repeat-containing protein At1g74580 
 mtr-u.5   25493815   putative pentatricopeptide repeat-containing protein At1g74580 
 sly-u.5   101248951   putative pentatricopeptide repeat-containing protein At1g74580 

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Top 50 coexpressed genes to 102618705 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102618705 (cit-r.1 coexpression data)

CoexMap"102618705"


citLOC102618705 | Entrez gene ID : 102618705    
Species cit ath gma vvi ppo mtr sly bdi hvu bra bna sbi ghi osa sot nta cre tae zma
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_024954712.2 [sequence] [blastp]
XP_024954713.2 [sequence] [blastp]
XP_024954714.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for XP_024954712.2)
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for XP_024954713.2)
cyto 6,  chlo 1,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for XP_024954714.2)
Subcellular
localization
TargetP
other 6  (predict for XP_024954712.2)
other 6  (predict for XP_024954713.2)
other 6  (predict for XP_024954714.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102618705
ath-u.5
for
AT1G74580
gma-u.5
for
100811379
vvi-u.5
for
100253631
ppo-u.5
for
7477189
mtr-u.5
for
25493815
sly-u.5
for
101248951


Ortholog ID: 12268
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta hvu sbi
Symbol LOC102618705 AT1G74580 LOC103831928 LOC107946511 LOC107941781 LOC106404447 LOC106354401 LOC100811379 LOC100253631 LOC7477189 LOC25493815 LOC101248951 LOC102585346 LOC107811606 LOC107807110 LOC123426391 LOC110432196
Function* putative pentatricopeptide repeat-containing protein At1g74580 Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 uncharacterized LOC107811606 uncharacterized LOC107807110 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00430 Taurine and hypotaurine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00480 Glutathione metabolism 2
nta00590 Arachidonic acid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00430 Taurine and hypotaurine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00480 Glutathione metabolism 2
nta00590 Arachidonic acid metabolism 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102618705 843798 103831928 107946511 107941781 106404447 106354401 100811379 100253631 7477189 25493815 101248951 102585346 107811606 107807110 123426391 110432196
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