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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102619013   basic helix-loop-helix protein A 
 ath-u.5   TT8   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   TT8   transcription factor TT8 
 ghi-r.1   107912431   transcription factor BHLH42 
 ghi-r.1   107934398   transcription factor BHLH42 
 ghi-r.1   107936498   transcription factor BHLH42 
 bna-r.1   106393678   transcription factor TT8 
 bna-r.1   106360955   transcription factor TT8-like 
 gma-u.5   100807157   basic helix-loop-helix protein A 
 gma-u.5   100786815   basic helix-loop-helix protein A 
 vvi-u.5   MYC1   bHLH-like DNA binding protein 
 ppo-u.5   7468710   transcription factor BHLH42 
 ppo-u.5   18099644   transcription factor BHLH42 
 mtr-u.5   11429566   basic helix-loop-helix protein A 
 sly-u.5   101254527   bHLH transcription factor AH 
 sot-r.1   102583413   transcription factor TT8-like 
 bdi-r.1   100839663   basic helix-loop-helix protein A 

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Top 50 coexpressed genes to 102619013 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102619013 (cit-r.1 coexpression data)

CoexMap"102619013"


citLOC102619013 | Entrez gene ID : 102619013      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot bdi tae zma nta osa sbi hvu cre
Paralog 1 1 1 3 2 2 1 2 1 1 1 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (408 genes)  IEA  
Protein NP_001306996.1 [sequence] [blastp]
XP_006479737.2 [sequence] [blastp]
XP_006479738.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for NP_001306996.1)
nucl 4,  chlo 4,  cyto 1  (predict for XP_006479737.2)
nucl 8,  chlo 1  (predict for XP_006479738.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001306996.1)
other 7  (predict for XP_006479737.2)
other 7  (predict for XP_006479738.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102619013
ath-u.5
for
TT8
bra-r.6
for
TT8
ghi-r.1
for
107912431
ghi-r.1
for
107934398
ghi-r.1
for
107936498
bna-r.1
for
106393678
bna-r.1
for
106360955
gma-u.5
for
100807157
gma-u.5
for
100786815
vvi-u.5
for
MYC1
ppo-u.5
for
7468710
ppo-u.5
for
18099644
mtr-u.5
for
11429566
sly-u.5
for
101254527
sot-r.1
for
102583413
bdi-r.1
for
100839663


Ortholog ID: 7270
Species cit ath bra ghi ghi ghi bna bna gma vvi ppo ppo mtr sly sot bdi
Symbol LOC102619013 TT8 TT8 LOC107912431 LOC107934398 LOC107936498 LOC106393678 LOC106360955 LOC100786815 MYC1 LOC7468710 LOC18099644 LOC11429566 LOC101254527 LOC102583413 LOC100839663
Function* basic helix-loop-helix protein A basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor TT8 transcription factor BHLH42 transcription factor BHLH42 transcription factor BHLH42 transcription factor TT8 transcription factor TT8-like basic helix-loop-helix protein A bHLH-like DNA binding protein transcription factor BHLH42 transcription factor BHLH42 basic helix-loop-helix protein A bHLH transcription factor AH transcription factor TT8-like basic helix-loop-helix protein A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00942 Anthocyanin biosynthesis 2
ath00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00942 Anthocyanin biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04075 Plant hormone signal transduction 2
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 4
sly00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 8
sot00944 Flavone and flavonol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102619013 826571 103838877 107912431 107934398 107936498 106393678 106360955 100786815 100251098 7468710 18099644 11429566 101254527 102583413 100839663
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