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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102619078   spindle pole body component 110-like 
 ath-u.5   AT3G05130   paramyosin-like protein 
 ath-u.5   AT5G27330   Prefoldin chaperone subunit family protein 
 bra-r.6   103874546   myosin-10 
 bra-r.6   103870852   tropomyosin-2 
 ghi-r.1   107958167   trichohyalin-like 
 ghi-r.1   107933826   hyaluronan mediated motility receptor 
 ghi-r.1   107899134   myosin heavy chain, non-muscle 
 bna-r.1   106453058   myosin-11-like 
 bna-r.1   106453023   cingulin-like 
 bna-r.1   106382243   hyaluronan mediated motility receptor-like 
 gma-u.5   113000392   putative U-box domain-containing protein 58 
 gma-u.5   102662957   chromosome partition protein Smc 
 gma-u.5   100781292   golgin IMH1 
 vvi-u.5   100262311   uncharacterized LOC100262311 
 ppo-u.5   18098844   intracellular protein transport protein USO1 
 ppo-u.5   7473886   uncharacterized LOC7473886 
 mtr-u.5   25484677   CAP-Gly domain-containing linker protein 1 
 sly-u.5   101250059   uncharacterized LOC101250059 
 sot-r.1   102605466   intracellular protein transport protein USO1 
 nta-r.1   107821905   uncharacterized LOC107821905 

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Top 50 coexpressed genes to 102619078 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102619078 (cit-r.1 coexpression data)

CoexMap"102619078"


citLOC102619078 | Entrez gene ID : 102619078    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 1 2 2 3 3 3 1 2 1 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (23 genes)  IEA  
GO:0006412 [list] [network] translation  (405 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (98 genes)  IEA  
GO:0005840 [list] [network] ribosome  (289 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (284 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_006471935.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_006471935.2)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_006471935.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102619078
ath-u.5
for
AT3G05130
ath-u.5
for
AT5G27330
bra-r.6
for
103874546
bra-r.6
for
103870852
ghi-r.1
for
107958167
ghi-r.1
for
107933826
ghi-r.1
for
107899134
bna-r.1
for
106453058
bna-r.1
for
106453023
bna-r.1
for
106382243
gma-u.5
for
113000392
gma-u.5
for
102662957
gma-u.5
for
100781292
vvi-u.5
for
100262311
ppo-u.5
for
18098844
ppo-u.5
for
7473886
mtr-u.5
for
25484677
sly-u.5
for
101250059
sot-r.1
for
102605466
nta-r.1
for
107821905


Ortholog ID: 11283
Species cit ath ath bra bra ghi ghi ghi bna bna bna gma gma gma vvi ppo ppo mtr sly sot nta
Symbol LOC102619078 AT3G05130 AT5G27330 LOC103874546 LOC103870852 LOC107958167 LOC107933826 LOC107887998 LOC106453058 LOC106453023 LOC106407278 LOC113000392 LOC102662957 LOC100781292 LOC100262311 LOC18098844 LOC7473886 LOC25484677 LOC101250059 LOC102605466 LOC107821905
Function* spindle pole body component 110-like paramyosin-like protein Prefoldin chaperone subunit family protein myosin-10 tropomyosin-2 trichohyalin-like hyaluronan mediated motility receptor myosin-7 myosin-11-like cingulin-like myosin-11 putative U-box domain-containing protein 58 chromosome partition protein Smc golgin IMH1 uncharacterized LOC100262311 intracellular protein transport protein USO1 uncharacterized LOC7473886 CAP-Gly domain-containing linker protein 1 uncharacterized LOC101250059 intracellular protein transport protein USO1 uncharacterized LOC107821905
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra00230 Purine metabolism 3
bra00250 Alanine, aspartate and glutamate metabolism 3
bra01240 Biosynthesis of cofactors 3
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 3
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 5
sot00010 Glycolysis / Gluconeogenesis 3
sot00030 Pentose phosphate pathway 3
sot00020 Citrate cycle (TCA cycle) 2
sot00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102619078 819675 832791 103874546 103870852 107958167 107933826 107887998 106453058 106453023 106407278 113000392 102662957 100781292 100262311 18098844 7473886 25484677 101250059 102605466 107821905
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