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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102619285   beta-D-xylosidase 4 
 ath-u.5   AT5G09700   Glycosyl hydrolase family protein 
 ath-u.5   BXL3   beta-xylosidase 3 
 ath-u.5   XYL4   beta-D-xylosidase 4 
 gma-u.5   100786744   beta-xylosidase/alpha-L-arabinofuranosidase 2 
 gma-u.5   100798939   beta-xylosidase/alpha-L-arabinofuranosidase 1 
 gma-u.5   100792948   beta-xylosidase/alpha-L-arabinofuranosidase 1 
 vvi-u.5   100247929   beta-xylosidase/alpha-L-arabinofuranosidase 2 
 vvi-u.5   100262089   beta-xylosidase/alpha-L-arabinofuranosidase 2 
 ppo-u.5   7480784   beta-xylosidase/alpha-L-arabinofuranosidase 2 
 ppo-u.5   7473018   beta-xylosidase/alpha-L-arabinofuranosidase 2 
 mtr-u.5   25493289   beta-xylosidase/alpha-L-arabinofuranosidase 2 
 mtr-u.5   11424908   beta-xylosidase/alpha-L-arabinofuranosidase 1 
 sly-u.5   XYL1   beta-D-xylosidase 1 
 sly-u.5   543515   beta-D-xylosidase 2 
 osa-u.5   4337166   beta-D-xylosidase 4 
 zma-u.5   100279996   Beta-D-xylosidase 4 

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Top 50 coexpressed genes to 102619285 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102619285 (cit-r.1 coexpression data)

CoexMap"102619285"


citLOC102619285 | Entrez gene ID : 102619285    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 3 3 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00520 [list] [network] Amino sugar and nucleotide sugar metabolism (112 genes)
GO BP
GO:0031222 [list] [network] arabinan catabolic process  (12 genes)  IEA  
GO:0045493 [list] [network] xylan catabolic process  (12 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (51 genes)  IEA  
GO MF
GO:0009044 [list] [network] xylan 1,4-beta-xylosidase activity  (12 genes)  IEA  
GO:0046556 [list] [network] alpha-L-arabinofuranosidase activity  (18 genes)  IEA  
Protein XP_006493288.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_006493288.2)
Subcellular
localization
TargetP
mito 5  (predict for XP_006493288.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102619285
ath-u.5
for
AT5G09700
ath-u.5
for
BXL3
ath-u.5
for
XYL4
gma-u.5
for
100786744
gma-u.5
for
100798939
gma-u.5
for
100792948
vvi-u.5
for
100247929
vvi-u.5
for
100262089
ppo-u.5
for
7480784
ppo-u.5
for
7473018
mtr-u.5
for
25493289
mtr-u.5
for
11424908
sly-u.5
for
XYL1
sly-u.5
for
543515
osa-u.5
for
4337166
zma-u.5
for
100279996


Ortholog ID: 3726
Species cit ath ath bra bra ghi ghi bna bna gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102619285 AT5G09700 BXL3 LOC103847226 LOC103837535 LOC107949186 LOC107940742 LOC106348034 LOC106377238 LOC100786744 LOC100792948 LOC100247929 LOC100262089 LOC7473018 LOC7480784 LOC25493289 LOC11424908 XYL1 LOC543515 LOC102598234 LOC102589670 LOC107764751 LOC107816752 LOC4337166 LOC100279996 LOC123047180 LOC123190838 LOC123428208 LOC8079556 LOC100820868
Function* beta-D-xylosidase 4 Glycosyl hydrolase family protein beta-xylosidase 3 beta-D-xylosidase 3 beta-D-xylosidase 4 beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-D-xylosidase 4 beta-D-xylosidase 4 beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-xylosidase/alpha-L-arabinofuranosidase 1 beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-xylosidase/alpha-L-arabinofuranosidase 1 beta-D-xylosidase 1 beta-D-xylosidase 2 beta-xylosidase/alpha-L-arabinofuranosidase 2-like beta-xylosidase/alpha-L-arabinofuranosidase 2-like beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-xylosidase/alpha-L-arabinofuranosidase 2 beta-D-xylosidase 4 Beta-D-xylosidase 4 beta-D-xylosidase 4 beta-D-xylosidase 4 beta-D-xylosidase 4-like beta-D-xylosidase 4 beta-D-xylosidase 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00330 Arginine and proline metabolism 2
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
sot00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
sot00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta04144 Endocytosis 2
nta00071 Fatty acid degradation 2
nta00410 beta-Alanine metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102619285 830829 830833 103847226 103837535 107949186 107940742 106348034 106377238 100786744 100792948 100247929 100262089 7473018 7480784 25493289 11424908 543514 543515 102598234 102589670 107764751 107816752 4337166 100279996 123047180 123190838 123428208 8079556 100820868
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