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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102610438   nuclear transcription factor Y subunit B-6 
 ath-u.5   NF-YB6   nuclear factor Y, subunit B6 
 ath-u.5   LEC1   Histone superfamily protein 
 bra-r.6   103829359   nuclear transcription factor Y subunit B-9 
 bra-r.6   103839510   nuclear transcription factor Y subunit B-6 
 ghi-r.1   107905698   nuclear transcription factor Y subunit B-6 
 bna-r.1   125575342   nuclear transcription factor Y subunit B-9-like 
 bna-r.1   106454772   nuclear transcription factor Y subunit B-9 
 bna-r.1   106400845   nuclear transcription factor Y subunit B-6-like 
 gma-u.5   LEC1-A   transcription factor LEC1-A 
 gma-u.5   LEC1-B   nuclear transcription factor Y subunit B-6-like 
 vvi-u.5   100855401   nuclear transcription factor Y subunit B-6 
 zma-u.5   103654015   nuclear transcription factor Y subunit B-2 
 zma-u.5   542498   leafy cotyledon 
 bdi-r.1   100830019   nuclear transcription factor Y subunit B-3 

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Top 50 coexpressed genes to 102610438 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102610438 (cit-r.1 coexpression data)

CoexMap"102619694"


citLOC102619694 | Entrez gene ID : 102619694    
Species cit ath bra ghi bna gma vvi zma bdi tae sly nta osa ppo sot sbi hvu mtr cre
Paralog 1 2 2 1 3 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (315 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (16 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific  (14 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (66 genes)  IEA  
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (175 genes)  IEA  
Protein XP_006475114.1 [sequence] [blastp]
XP_052289194.1 [sequence] [blastp]
XP_052289195.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  nucl_plas 3,  cyto 3,  chlo 1,  pero 1  (predict for XP_006475114.1)
chlo 5,  nucl 4,  mito 1  (predict for XP_052289194.1)
mito 6,  nucl 1,  chlo 1,  cyto_nucl 1  (predict for XP_052289195.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_006475114.1)
chlo 5,  other 3  (predict for XP_052289194.1)
chlo 6  (predict for XP_052289195.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102610438
ath-u.5
for
NF-YB6
ath-u.5
for
LEC1
bra-r.6
for
103829359
bra-r.6
for
103839510
ghi-r.1
for
107905698
bna-r.1
for
125575342
bna-r.1
for
106454772
bna-r.1
for
106400845
gma-u.5
for
LEC1-A
gma-u.5
for
LEC1-B
vvi-u.5
for
100855401
zma-u.5
for
103654015
zma-u.5
for
542498
bdi-r.1
for
100830019


Ortholog ID: 3046
Species cit ath ath bra bra ghi bna bna bna gma gma vvi sot zma zma bdi
Symbol LOC102610438 NF-YB6 LEC1 LOC103829359 LOC103839510 LOC121229421 LOC106432034 LOC106425624 LOC106418177 LEC1-B LOC547959 LOC100855401 LOC102592041 LOC103654015 LOC542498 LOC100830019
Function* nuclear transcription factor Y subunit B-6 nuclear factor Y, subunit B6 Histone superfamily protein nuclear transcription factor Y subunit B-9 nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-9-like nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-6-like nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-1-like nuclear transcription factor Y subunit B-2 leafy cotyledon nuclear transcription factor Y subunit B-3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102610438 834818 838800 103829359 103839510 121229421 106432034 106425624 106418177 100800011 547959 100855401 102592041 103654015 542498 100830019
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