ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102619994	nucleoside hydrolase 3-like
cit-r.1	102620115	nucleoside hydrolase 3-like
ath-u.5	NSH3	inosine-uridine preferring nucleoside hydrolase family protein
bra-r.6	103845800	uncharacterized LOC103845800
ghi-r.1	107933831	uncharacterized LOC107933831
ghi-r.1	121223349	uncharacterized LOC121223349
ghi-r.1	107916115	uncharacterized LOC107916115
bna-r.1	106387818	uncharacterized LOC106387818
bna-r.1	106371905	uncharacterized LOC106371905
gma-u.5	100819333	uncharacterized LOC100819333
gma-u.5	100788041	uncharacterized LOC100788041
vvi-u.5	100245166	nucleoside hydrolase 3
vvi-u.5	100263026	nucleoside hydrolase 3
ppo-u.5	7473265	nucleoside hydrolase 3
mtr-u.5	11443360	uncharacterized LOC11443360
mtr-u.5	11408463	uncharacterized LOC11408463
mtr-u.5	11422915	uncharacterized LOC11422915
sly-u.5	101245199	nucleoside hydrolase 3-like
sly-u.5	101244900	nucleoside hydrolase 3-like
sly-u.5	101247856	nucleoside hydrolase 3-like
sot-r.1	102590399	uncharacterized LOC102590399
sot-r.1	102590451	uncharacterized LOC102590451
nta-r.1	107811251	nucleoside hydrolase 3-like
nta-r.1	107788670	nucleoside hydrolase 3
nta-r.1	107828893	nucleoside hydrolase 3-like
osa-u.5	4338757	nucleoside hydrolase 3
osa-u.5	4338756	nucleoside hydrolase 3
zma-u.5	100383621	uncharacterized LOC100383621
tae-r.2	123055388	uncharacterized LOC123055388
tae-r.2	123132339	uncharacterized LOC123132339
hvu-r.1	123441421	uncharacterized LOC123441421
hvu-r.1	123441308	uncharacterized LOC123441308
hvu-r.1	123441456	uncharacterized LOC123441456
sbi-r.1	8076938	pyrimidine-specific ribonucleoside hydrolase RihA
sbi-r.1	8076941	uncharacterized LOC8076941
sbi-r.1	8085119	uncharacterized LOC8085119
bdi-r.1	100844761	uncharacterized LOC100844761
bdi-r.1	100842948	uncharacterized LOC100842948

Top 50 coexpressed genes to 102619994 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102619994 (cit-r.1 coexpression data)

CoexMap"102619994"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016799 [list] [network] hydrolase activity, hydrolyzing N-glycosyl compounds

(66 genes)

IEA

Protein

XP_052297252.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, chlo 2, cyto 2, nucl_plas 2, mito_plas 2

(predict for XP_052297252.1)

Subcellular
localization
TargetP

other 7, mito 3

(predict for XP_052297252.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102619994	cit-r.1 for 102620115	ath-u.5 for NSH3	bra-r.6 for 103845800	ghi-r.1 for 107933831	ghi-r.1 for 121223349	ghi-r.1 for 107916115	bna-r.1 for 106387818	bna-r.1 for 106371905	gma-u.5 for 100819333	gma-u.5 for 100788041	vvi-u.5 for 100245166	vvi-u.5 for 100263026	ppo-u.5 for 7473265	mtr-u.5 for 11443360	mtr-u.5 for 11408463	mtr-u.5 for 11422915	sly-u.5 for 101245199	sly-u.5 for 101244900	sly-u.5 for 101247856	sot-r.1 for 102590399	sot-r.1 for 102590451	nta-r.1 for 107811251	nta-r.1 for 107788670	nta-r.1 for 107828893	osa-u.5 for 4338757	osa-u.5 for 4338756	zma-u.5 for 100383621	tae-r.2 for 123055388	tae-r.2 for 123132339	hvu-r.1 for 123441421	hvu-r.1 for 123441308	hvu-r.1 for 123441456	sbi-r.1 for 8076938	sbi-r.1 for 8076941	sbi-r.1 for 8085119	bdi-r.1 for 100844761	bdi-r.1 for 100842948

Ortholog

Ortholog ID: 3262

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

NSH3

Function^*

nucleoside hydrolase 3-like

inosine-uridine preferring nucleoside hydrolase family protein

uncharacterized LOC103845800

uncharacterized LOC107933831

uncharacterized LOC107916115

uncharacterized LOC107926350

uncharacterized LOC106387818

uncharacterized LOC106371905

uncharacterized LOC100819333

uncharacterized LOC100788041

nucleoside hydrolase 3

uncharacterized LOC11443360

uncharacterized LOC11408463

uncharacterized LOC11422915

nucleoside hydrolase 3-like

uncharacterized LOC102590399

uncharacterized LOC102590451

nucleoside hydrolase 3

nucleoside hydrolase 3-like

nucleoside hydrolase 3

uncharacterized LOC100383621

uncharacterized LOC123055388

uncharacterized LOC123132496

uncharacterized LOC123181980

uncharacterized LOC123441421

uncharacterized LOC123441308

uncharacterized LOC123441456

pyrimidine-specific ribonucleoside hydrolase RihA

uncharacterized LOC8076941

uncharacterized LOC8085119

uncharacterized LOC100844761

uncharacterized LOC100842948

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3
cit01240	Biosynthesis of cofactors	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	3
ath00562	Inositol phosphate metabolism	2
ath04070	Phosphatidylinositol signaling system	2
ath00052	Galactose metabolism	2
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra00940	Phenylpropanoid biosynthesis	3
bra00010	Glycolysis / Gluconeogenesis	2
bra00053	Ascorbate and aldarate metabolism	2
bra00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00908	Zeatin biosynthesis	2
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	4
bna01040	Biosynthesis of unsaturated fatty acids	4
bna01212	Fatty acid metabolism	4
bna04141	Protein processing in endoplasmic reticulum	3
bna00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	4
bna01040	Biosynthesis of unsaturated fatty acids	4
bna01212	Fatty acid metabolism	4
bna04141	Protein processing in endoplasmic reticulum	3
bna00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	2
gma00561	Glycerolipid metabolism	2
gma00600	Sphingolipid metabolism	2
gma00603	Glycosphingolipid biosynthesis - globo and isoglobo series	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00071	Fatty acid degradation	2
mtr00592	alpha-Linolenic acid metabolism	2
mtr01212	Fatty acid metabolism	2
mtr00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00071	Fatty acid degradation	2
mtr00592	alpha-Linolenic acid metabolism	2
mtr01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00592	alpha-Linolenic acid metabolism	3
sly01040	Biosynthesis of unsaturated fatty acids	2
sly01212	Fatty acid metabolism	2
sly00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01230	Biosynthesis of amino acids	4
sot00900	Terpenoid backbone biosynthesis	4
sot00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01230	Biosynthesis of amino acids	2
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	6
osa00061	Fatty acid biosynthesis	4
osa00780	Biotin metabolism	4
osa01212	Fatty acid metabolism	4
osa00785	Lipoic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma02010	ABC transporters	2
zma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae04136	Autophagy - other	3
tae04382	Cornified envelope formation	3
tae00270	Cysteine and methionine metabolism	3
tae00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3
tae00480	Glutathione metabolism	3
tae01240	Biosynthesis of cofactors	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	2
sbi00500	Starch and sucrose metabolism	2
sbi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00195	Photosynthesis	6
sbi03010	Ribosome	6
sbi03008	Ribosome biogenesis in eukaryotes	2
sbi00190	Oxidative phosphorylation	2

Expression

Expression pattern

Entrez Gene ID^*

102619994

102620115

832004

103845800

107933831

107916115

107926350

106387818

106371905

100819333

100788041

100245166

100263026

7473265

11443360

11408463

11422915

101245199

101244900

101247856

102590399

102590451

107788670

107828893

107826221

4338757

4338756

100383621

123055388

123132496

123181980

123441421

123441308

123441456

8076938

8076941

8085119

100844761

100842948

The preparation time of this page was 0.1 [sec].


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	3	2	2	2	1	3	3	2	3	2	1	2	3	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102619994 (cit-r.1 coexpression data)

Top 50 enrichment test to 102619994 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**