ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT2G38430	uncharacterized protein
ath-u.5	AT3G54310	DNA-directed RNA polymerase subunit alpha
bra-r.6	103857783	uncharacterized LOC103857783
ghi-r.1	107961900	uncharacterized LOC107961900
ghi-r.1	107892479	uncharacterized LOC107892479
bna-r.1	106405879	uncharacterized LOC106405879
vvi-u.5	100252715	uncharacterized LOC100252715
ppo-u.5	7469853	uncharacterized LOC7469853
ppo-u.5	18108223	uncharacterized LOC18108223
sly-u.5	101268176	uncharacterized LOC101268176
sot-r.1	102587765	uncharacterized LOC102587765
sot-r.1	102584096	uncharacterized LOC102584096
sot-r.1	102584681	uncharacterized LOC102584681
nta-r.1	107763629	uncharacterized LOC107763629
nta-r.1	107801463	uncharacterized LOC107801463
osa-u.5	4329429	uncharacterized LOC4329429
zma-u.5	100278525	uncharacterized LOC100278525
zma-u.5	109946040	uncharacterized LOC109946040
tae-r.2	123054430	uncharacterized LOC123054430
tae-r.2	123143966	uncharacterized LOC123143966
hvu-r.1	123401463	uncharacterized LOC123401463
sbi-r.1	110435088	uncharacterized LOC110435088
bdi-r.1	100821526	uncharacterized LOC100821526

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_052294352.1 [sequence] [blastp]
XP_052294354.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, nucl 3, chlo 1, cyto 1, cysk_nucl 1, nucl_plas 1	(predict for XP_052294352.1)
extr 4, nucl 3, chlo 1, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_052294354.1)

Subcellular
localization
TargetP

scret 9	(predict for XP_052294352.1)
scret 9	(predict for XP_052294354.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT2G38430	ath-u.5 for AT3G54310	bra-r.6 for 103857783	ghi-r.1 for 107961900	ghi-r.1 for 107892479	bna-r.1 for 106405879	vvi-u.5 for 100252715	ppo-u.5 for 7469853	ppo-u.5 for 18108223	sly-u.5 for 101268176	sot-r.1 for 102587765	sot-r.1 for 102584096	sot-r.1 for 102584681	nta-r.1 for 107763629	nta-r.1 for 107801463	osa-u.5 for 4329429	zma-u.5 for 100278525	zma-u.5 for 109946040	tae-r.2 for 123054430	tae-r.2 for 123143966	hvu-r.1 for 123401463	sbi-r.1 for 110435088	bdi-r.1 for 100821526

Ortholog

Ortholog ID: 2457

Species

cit

ath

bra

ghi

bna

vvi

ppo

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102617183

uncharacterized protein

DNA-directed RNA polymerase subunit alpha

uncharacterized LOC103865669

uncharacterized LOC107961900

uncharacterized LOC107892479

uncharacterized LOC106438151

uncharacterized LOC100252715

uncharacterized LOC7469853

uncharacterized LOC18108223

uncharacterized LOC101268176

uncharacterized LOC102584096

uncharacterized LOC102587213

uncharacterized LOC107801463

uncharacterized LOC107780488

uncharacterized LOC4329429

uncharacterized LOC100278525

uncharacterized LOC109946040

uncharacterized LOC123143966

uncharacterized LOC123401463

uncharacterized LOC110435088

uncharacterized LOC100821526

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	2
ath04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00020	Citrate cycle (TCA cycle)	3
bra01200	Carbon metabolism	3
bra00640	Propanoate metabolism	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00260	Glycine, serine and threonine metabolism	4
ppo01200	Carbon metabolism	4
ppo00630	Glyoxylate and dicarboxylate metabolism	3
ppo00670	One carbon pool by folate	3
ppo00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	4
nta00510	N-Glycan biosynthesis	3
nta00513	Various types of N-glycan biosynthesis	3
nta04141	Protein processing in endoplasmic reticulum	3
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae00730	Thiamine metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00904	Diterpenoid biosynthesis	3

Expression

Expression pattern

Entrez Gene ID^*

102617183

818424

824598

103865669

107961900

107892479

106438151

100252715

7469853

18108223

101268176

102584096

102587213

107801463

107780488

4329429

100278525

109946040

123143966

123401463

110435088

100821526

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT2G38430 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G38430 (ath-u.5 coexpression data)


Species	ath	bra	ghi	bna	vvi	ppo	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	gma	cit	mtr
Paralog	2	1	2	1	1	2	1	3	2	1	2	2	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT2G38430 (ath-u.5 coexpression data)

Top 50 enrichment test to AT2G38430 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**