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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102622684   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 
 ath-u.5   AT1G27900   RNA helicase family protein 
 gma-u.5   100793583   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 
 vvi-u.5   100245855   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 
 ppo-u.5   7477037   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 
 mtr-u.5   25501723   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 
 sly-u.5   101264721   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 
 osa-u.5   4350353   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 
 zma-u.5   103638000   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 

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Top 50 coexpressed genes to 102622684 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102622684 (cit-r.1 coexpression data)

CoexMap"102622684"


citLOC102622684 | Entrez gene ID : 102622684    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03040 [list] [network] Spliceosome (220 genes)
GO BP
GO CC
GO:0005622 [list] [network] intracellular anatomical structure  (6549 genes)  IEA  
GO MF
GO:0016887 [list] [network] ATP hydrolysis activity  (454 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_006484063.1 [sequence] [blastp]
XP_024956793.1 [sequence] [blastp]
XP_024956794.1 [sequence] [blastp]
XP_024956795.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_006484063.1)
cyto 5,  nucl 3,  cyto_plas 3  (predict for XP_024956793.1)
nucl 6,  cyto 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_024956794.1)
nucl 6,  cyto 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_024956795.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_006484063.1)
other 7,  chlo 3  (predict for XP_024956793.1)
other 7,  chlo 3  (predict for XP_024956794.1)
other 7,  chlo 3  (predict for XP_024956795.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102622684
ath-u.5
for
AT1G27900
gma-u.5
for
100793583
vvi-u.5
for
100245855
ppo-u.5
for
7477037
mtr-u.5
for
25501723
sly-u.5
for
101264721
osa-u.5
for
4350353
zma-u.5
for
103638000


Ortholog ID: 11069
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC102622684 AT1G27900 LOC103835367 LOC107886452 LOC107909825 LOC111199777 LOC106389571 LOC100793583 LOC100245855 LOC7477037 LOC25501723 LOC101264721 LOC102578166 LOC107775248 LOC107765958 LOC4350353 LOC103638000 LOC123086872 LOC123096108 LOC123447760 LOC8064050 LOC100831991 CHLRE_12g520150v5
Function* probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 RNA helicase family protein probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath03040 Spliceosome 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 8
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03450 Non-homologous end-joining 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 7
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 7
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly03440 Homologous recombination 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi03015 mRNA surveillance pathway 2
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102622684 839683 103835367 107886452 107909825 111199777 106389571 100793583 100245855 7477037 25501723 101264721 102578166 107775248 107765958 4350353 103638000 123086872 123096108 123447760 8064050 100831991 5722598
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