Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102623304   beta-amylase 
 ath-u.5   BAM5   beta-amylase 5 
 ath-u.5   BAM6   beta-amylase 6 
 bra-r.6   103867633   beta-amylase 6 
 bra-r.6   103833505   beta-amylase 5 
 ghi-r.1   107886910   beta-amylase 
 ghi-r.1   107886845   beta-amylase 
 bna-r.1   125577304   beta-amylase 5 
 bna-r.1   106351474   beta-amylase 5-like 
 bna-r.1   106451309   beta-amylase 6 
 gma-u.5   100807365   beta-amylase 
 gma-u.5   100787580   beta-amylase 
 gma-u.5   547931   beta-amylase 
 vvi-u.5   100251739   beta-amylase 
 ppo-u.5   18107014   beta-amylase 
 mtr-u.5   11422644   beta-amylase 
 mtr-u.5   25492017   beta-amylase 
 sly-u.5   101247340   beta-amylase 
 sot-r.1   102592633   beta-amylase-like 
 sot-r.1   102584563   beta-amylase-like 
 nta-r.1   107802870   beta-amylase 
 nta-r.1   107807721   beta-amylase 
 osa-u.5   4343510   beta-amylase 
 zma-u.5   100382206   beta-amylase 
 tae-r.2   542896   beta-amylase 
 tae-r.2   543318   beta-amylase Tri a 17-like 
 tae-r.2   123188372   beta-amylase Tri a 17-like 
 hvu-r.1   123425808   beta-amylase-like 
 sbi-r.1   8084089   beta-amylase 
 sbi-r.1   110432978   beta-amylase 
 bdi-r.1   100831619   beta-amylase 
 bdi-r.1   100831927   beta-amylase 

close


Top 50 coexpressed genes to 102623304 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102623304 (cit-r.1 coexpression data)

CoexMap"102623304"


citLOC102623304 | Entrez gene ID : 102623304    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 2 2 3 3 1 1 2 1 2 2 1 1 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00500 [list] [network] Starch and sucrose metabolism (144 genes)
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (39 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (10 genes)  IEA  
Protein XP_006469732.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cyto_E.R. 4,  chlo 3  (predict for XP_006469732.1)
Subcellular
localization
TargetP
other 7,  scret 5  (predict for XP_006469732.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102623304
ath-u.5
for
BAM5
ath-u.5
for
BAM6
bra-r.6
for
103867633
bra-r.6
for
103833505
ghi-r.1
for
107886910
ghi-r.1
for
107886845
bna-r.1
for
125577304
bna-r.1
for
106351474
bna-r.1
for
106451309
gma-u.5
for
100807365
gma-u.5
for
100787580
gma-u.5
for
547931
vvi-u.5
for
100251739
ppo-u.5
for
18107014
mtr-u.5
for
11422644
mtr-u.5
for
25492017
sly-u.5
for
101247340
sot-r.1
for
102592633
sot-r.1
for
102584563
nta-r.1
for
107802870
nta-r.1
for
107807721
osa-u.5
for
4343510
zma-u.5
for
100382206
tae-r.2
for
542896
tae-r.2
for
543318
tae-r.2
for
123188372
hvu-r.1
for
123425808
sbi-r.1
for
8084089
sbi-r.1
for
110432978
bdi-r.1
for
100831619
bdi-r.1
for
100831927


Ortholog ID: 4201
Species cit ath ath bra bra ghi ghi bna bna bna gma gma gma vvi ppo mtr mtr sly sot sot nta nta osa zma tae tae tae hvu sbi sbi bdi bdi
Symbol LOC102623304 BAM5 BAM6 LOC103867633 LOC103833505 LOC107886910 LOC107886845 LOC125577304 LOC106380582 LOC106360628 LOC100807365 LOC100787580 LOC547931 LOC100251739 LOC18107014 LOC11422644 LOC25492017 LOC101247340 LOC102592633 LOC102584563 LOC107802870 LOC107807721 LOC4343510 LOC100382206 LOC543318 LOC123094045 LOC123044614 LOC123425808 LOC8084089 LOC110432978 LOC100831619 LOC100831927
Function* beta-amylase beta-amylase 5 beta-amylase 6 beta-amylase 6 beta-amylase 5 beta-amylase beta-amylase beta-amylase 5 beta-amylase 6 beta-amylase 5 beta-amylase beta-amylase beta-amylase beta-amylase beta-amylase beta-amylase beta-amylase beta-amylase beta-amylase-like beta-amylase-like beta-amylase beta-amylase beta-amylase beta-amylase beta-amylase Tri a 17-like beta-amylase beta-amylase Tri a 17-like beta-amylase-like beta-amylase beta-amylase beta-amylase beta-amylase
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 4
bra01200 Carbon metabolism 4
bra00260 Glycine, serine and threonine metabolism 2
bra00020 Citrate cycle (TCA cycle) 2
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00220 Arginine biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna00260 Glycine, serine and threonine metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 4
gma00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 7
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
nta00195 Photosynthesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 6
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00460 Cyanoamino acid metabolism 8
sbi00966 Glucosinolate biosynthesis 2
sbi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi01200 Carbon metabolism 3
bdi00710 Carbon fixation by Calvin cycle 2
bdi00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102623304 827185 817789 103867633 103833505 107886910 107886845 125577304 106380582 106360628 100807365 100787580 547931 100251739 18107014 11422644 25492017 101247340 102592633 102584563 107802870 107807721 4343510 100382206 543318 123094045 123044614 123425808 8084089 110432978 100831619 100831927
The preparation time of this page was 0.2 [sec].