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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102624161   uncharacterized LOC102624161 
 ath-u.5   AT3G13882   Ribosomal protein L34 
 bra-r.6   103859542   uncharacterized LOC103859542 
 bra-r.6   103859546   uncharacterized LOC103859546 
 bra-r.6   103870086   uncharacterized LOC103870086 
 ghi-r.1   107937246   uncharacterized LOC107937246 
 ghi-r.1   107933607   uncharacterized LOC107933607 
 bna-r.1   111215727   uncharacterized LOC111215727 
 bna-r.1   111209312   uncharacterized LOC111209312 
 bna-r.1   106390456   uncharacterized LOC106390456 
 gma-u.5   100305667   uncharacterized LOC100305667 
 gma-u.5   100809386   uncharacterized LOC100809386 
 vvi-u.5   100265274   uncharacterized LOC100265274 
 ppo-u.5   7483520   uncharacterized LOC7483520 
 mtr-u.5   25500484   uncharacterized LOC25500484 
 sly-u.5   101254397   uncharacterized LOC101254397 
 sot-r.1   102589256   uncharacterized LOC102589256 
 nta-r.1   107825667   uncharacterized LOC107825667 
 nta-r.1   107796706   uncharacterized LOC107796706 
 osa-u.5   4326350   uncharacterized LOC4326350 
 zma-u.5   100272242   LIN1 protein 
 zma-u.5   100284012   LIN1 protein 
 tae-r.2   123078421   uncharacterized LOC123078421 
 tae-r.2   123069961   uncharacterized LOC123069961 
 tae-r.2   123061327   uncharacterized LOC123061327 
 hvu-r.1   123443741   uncharacterized LOC123443741 
 sbi-r.1   8078206   uncharacterized LOC8078206 
 bdi-r.1   100840312   uncharacterized LOC100840312 
 cre-r.1   CHLRE_14g608970v5   uncharacterized protein 
 cre-r.1   CHLRE_14g609050v5   uncharacterized protein 

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Top 50 coexpressed genes to 102624161 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102624161 (cit-r.1 coexpression data)

CoexMap"102624161"


citLOC102624161 | Entrez gene ID : 102624161    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 3 2 3 2 1 1 1 1 1 2 1 2 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03010 [list] [network] Ribosome (798 genes)
GO BP
GO:0006412 [list] [network] translation  (405 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (21 genes)  IEA  
GO:0005840 [list] [network] ribosome  (289 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (284 genes)  IEA  
Protein XP_006466006.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  mito 2  (predict for XP_006466006.2)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_006466006.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102624161
ath-u.5
for
AT3G13882
bra-r.6
for
103859542
bra-r.6
for
103859546
bra-r.6
for
103870086
ghi-r.1
for
107937246
ghi-r.1
for
107933607
bna-r.1
for
111215727
bna-r.1
for
111209312
bna-r.1
for
106390456
gma-u.5
for
100305667
gma-u.5
for
100809386
vvi-u.5
for
100265274
ppo-u.5
for
7483520
mtr-u.5
for
25500484
sly-u.5
for
101254397
sot-r.1
for
102589256
nta-r.1
for
107825667
nta-r.1
for
107796706
osa-u.5
for
4326350
zma-u.5
for
100272242
zma-u.5
for
100284012
tae-r.2
for
123078421
tae-r.2
for
123069961
tae-r.2
for
123061327
hvu-r.1
for
123443741
sbi-r.1
for
8078206
bdi-r.1
for
100840312
cre-r.1
for
CHLRE_14g608970v5
cre-r.1
for
CHLRE_14g609050v5


Ortholog ID: 7104
Species cit ath bra bra bra ghi ghi bna bna bna gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre cre
Symbol LOC102624161 AT3G13882 LOC103859542 LOC103859546 LOC103870086 LOC107937246 LOC107933607 LOC111215727 LOC111209312 BNAC03G38190D LOC100305667 LOC100809386 LOC100265274 LOC7483520 LOC25500484 LOC101254397 LOC102589256 LOC107825667 LOC107796706 LOC4326350 LOC100272242 LOC100284012 LOC123078421 LOC123069961 LOC123061327 LOC123443741 LOC8078206 LOC100840312 CHLRE_14g608970v5 CHLRE_14g609050v5
Function* uncharacterized LOC102624161 Ribosomal protein L34 uncharacterized LOC103859542 uncharacterized LOC103859546 uncharacterized LOC103870086 uncharacterized LOC107937246 uncharacterized LOC107933607 uncharacterized LOC111215727 uncharacterized LOC111209312 uncharacterized BNAC03G38190D uncharacterized LOC100305667 uncharacterized LOC100809386 uncharacterized LOC100265274 uncharacterized LOC7483520 uncharacterized LOC25500484 uncharacterized LOC101254397 uncharacterized LOC102589256 uncharacterized LOC107825667 uncharacterized LOC107796706 uncharacterized LOC4326350 LIN1 protein LIN1 protein uncharacterized LOC123078421 uncharacterized LOC123069961 uncharacterized LOC123061327 uncharacterized LOC123443741 uncharacterized LOC8078206 uncharacterized LOC100840312 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra00970 Aminoacyl-tRNA biosynthesis 5
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03040 Spliceosome 3
bdi03050 Proteasome 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102624161 3768810 103859542 103859546 103870086 107937246 107933607 111215727 111209312 106389161 100305667 100809386 100265274 7483520 25500484 101254397 102589256 107825667 107796706 4326350 100272242 100284012 123078421 123069961 123061327 123443741 8078206 100840312 66056140 66056142
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