ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cit-r.1	102624686	probable glutathione peroxidase 8
ath-u.5	GPX8	glutathione peroxidase 8
ath-u.5	GPX7	glutathione peroxidase 7
ath-u.5	GPX6	glutathione peroxidase 6
gma-u.5	100500036	putative glutathione peroxidase
gma-u.5	113001172	probable glutathione peroxidase 4
vvi-u.5	100254672	probable glutathione peroxidase 8
vvi-u.5	100259774	probable phospholipid hydroperoxide glutathione peroxidase
vvi-u.5	100245705	probable glutathione peroxidase 2
ppo-u.5	7491769	probable glutathione peroxidase 2
ppo-u.5	7479317	probable phospholipid hydroperoxide glutathione peroxidase
ppo-u.5	7472772	probable glutathione peroxidase 8
mtr-u.5	11432980	phospholipid hydroperoxide glutathione peroxidase, chloroplastic
mtr-u.5	11427109	probable phospholipid hydroperoxide glutathione peroxidase
mtr-u.5	11415756	probable phospholipid hydroperoxide glutathione peroxidase
sly-u.5	GPXle-2	glutathione peroxidase
sly-u.5	101248896	probable phospholipid hydroperoxide glutathione peroxidase
sly-u.5	101267388	probable glutathione peroxidase 8
osa-u.5	4340341	probable phospholipid hydroperoxide glutathione peroxidase
osa-u.5	4330235	probable phospholipid hydroperoxide glutathione peroxidase
osa-u.5	4332876	probable glutathione peroxidase 4
zma-u.5	100272844	Glutathione peroxidase
zma-u.5	100273297	putative glutathione peroxidase
zma-u.5	100283257	uncharacterized LOC100283257

Top 50 coexpressed genes to 102624686 (cit-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102624686 (cit-r.1 coexpression data)

CoexMap"102624686"

[Cytoscape]

Annotation

functional annotation

KEGG

cit00480 [list] [network] Glutathione metabolism (98 genes)

GO BP

GO:0006979 [list] [network] response to oxidative stress

(170 genes)

IEA

GO CC

GO MF

GO:0004602 [list] [network] glutathione peroxidase activity

(6 genes)

IEA

Protein

XP_006476628.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 3, extr 1, chlo_mito 1

(predict for XP_006476628.2)

Subcellular
localization
TargetP

other 8

(predict for XP_006476628.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102624686	ath-u.5 for GPX8	ath-u.5 for GPX7	ath-u.5 for GPX6	gma-u.5 for 100500036	gma-u.5 for 113001172	vvi-u.5 for 100254672	vvi-u.5 for 100259774	vvi-u.5 for 100245705	ppo-u.5 for 7491769	ppo-u.5 for 7479317	ppo-u.5 for 7472772	mtr-u.5 for 11432980	mtr-u.5 for 11427109	mtr-u.5 for 11415756	sly-u.5 for GPXle-2	sly-u.5 for 101248896	sly-u.5 for 101267388	osa-u.5 for 4340341	osa-u.5 for 4330235	osa-u.5 for 4332876	zma-u.5 for 100272844	zma-u.5 for 100273297	zma-u.5 for 100283257

Ortholog

Ortholog ID: 368

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC102616580

LOC102620737

GPX2

GPX7

Function^*

probable phospholipid hydroperoxide glutathione peroxidase

glutathione peroxidase 2

glutathione peroxidase 7

probable glutathione peroxidase 8

probable phospholipid hydroperoxide glutathione peroxidase

probable glutathione peroxidase 8

probable glutathione peroxidase 3, mitochondrial

uncharacterized LOC100527421

putative glutathione peroxidase

probable glutathione peroxidase 5

probable phospholipid hydroperoxide glutathione peroxidase

probable glutathione peroxidase 4

phospholipid hydroperoxide glutathione peroxidase, chloroplastic

probable phospholipid hydroperoxide glutathione peroxidase

phospholipid hydroperoxide glutathione peroxidase

probable phospholipid hydroperoxide glutathione peroxidase

probable glutathione peroxidase 8

probable phospholipid hydroperoxide glutathione peroxidase

putative glutathione peroxidase 5

putative glutathione peroxidase 2

probable glutathione peroxidase 4

probable glutathione peroxidase 2

GP protein

uncharacterized LOC100283257

probable glutathione peroxidase 4

probable phospholipid hydroperoxide glutathione peroxidase

phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic-like

probable phospholipid hydroperoxide glutathione peroxidase

probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial

probable glutathione peroxidase 2

probable glutathione peroxidase 4

probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01240	Biosynthesis of cofactors	2
cit03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	5
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00061	Fatty acid biosynthesis	4
bra01212	Fatty acid metabolism	4
bra01200	Carbon metabolism	3
bra01230	Biosynthesis of amino acids	3
bra00780	Biotin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00620	Pyruvate metabolism	4
ghi00480	Glutathione metabolism	4
ghi00260	Glycine, serine and threonine metabolism	2
ghi00670	One carbon pool by folate	2
ghi00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	10
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2
bna00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	3
gma00480	Glutathione metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2
vvi03040	Spliceosome	2
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	3
ppo00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	5
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00053	Ascorbate and aldarate metabolism	3
mtr00480	Glutathione metabolism	3
mtr00010	Glycolysis / Gluconeogenesis	2
mtr00561	Glycerolipid metabolism	2
mtr00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta00480	Glutathione metabolism	2
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	7
zma01200	Carbon metabolism	6
zma00020	Citrate cycle (TCA cycle)	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	6
zma04130	SNARE interactions in vesicular transport	4
zma04145	Phagosome	3
zma04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	5
tae00280	Valine, leucine and isoleucine degradation	3
tae00410	beta-Alanine metabolism	3
tae00640	Propanoate metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00195	Photosynthesis	4
hvu00970	Aminoacyl-tRNA biosynthesis	2
hvu00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	5
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	4
sbi00511	Other glycan degradation	3
sbi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	8
bdi01200	Carbon metabolism	7
bdi00010	Glycolysis / Gluconeogenesis	6
bdi00710	Carbon fixation by Calvin cycle	4
bdi00270	Cysteine and methionine metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

102616580

102620737

817715

829316

103838277

107947021

107947026

111198514

100527421

100500036

100242497

100259774

7479317

7466277

11432980

11427109

544261

101248896

102599983

102591042

107812623

107774241

4332876

4350287

541968

100283257

123097394

123145015

123412075

123428484

8056585

8155431

100827410

100840484

5718788

The preparation time of this page was 0.2 [sec].


Species	cit	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	3	2	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102624686 (cit-r.1 coexpression data)

Top 50 enrichment test to 102624686 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**