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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102624788   probable polyamine oxidase 4 
 ath-u.5   PAO2   polyamine oxidase 2 
 ath-u.5   PAO3   polyamine oxidase 3 
 ath-u.5   PAO4   polyamine oxidase 4 
 gma-u.5   100782576   polyamine oxidase 5 
 gma-u.5   100785056   polyamine oxidase 2 
 gma-u.5   100790521   polyamine oxidase 5 
 vvi-u.5   100250153   probable polyamine oxidase 4 
 vvi-u.5   100245491   polyamine oxidase 2 
 ppo-u.5   7468334   probable polyamine oxidase 4 
 ppo-u.5   7468715   polyamine oxidase 2 
 ppo-u.5   7464825   polyamine oxidase 2 
 mtr-u.5   25490550   polyamine oxidase 2 
 mtr-u.5   11426561   probable polyamine oxidase 4 
 mtr-u.5   11435419   polyamine oxidase 2 
 sly-u.5   101252005   polyamine oxidase 2-like 
 sly-u.5   101264170   probable polyamine oxidase 4 
 sly-u.5   101260014   polyamine oxidase 2 
 osa-u.5   4337046   polyamine oxidase 3-like 
 osa-u.5   4337359   probable polyamine oxidase 2 
 osa-u.5   4337360   polyamine oxidase 5-like 
 zma-u.5   101027113   lysine-specific histone demethylase 1 
 zma-u.5   100384522   uncharacterized LOC100384522 
 zma-u.5   100191603   uncharacterized LOC100191603 

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Top 50 coexpressed genes to 102624788 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102624788 (cit-r.1 coexpression data)

CoexMap"102624788"


citLOC102624788 | Entrez gene ID : 102624788    
Species cit ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu bdi sot tae bna ghi
Paralog 1 3 3 2 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00330 [list] [network] Arginine and proline metabolism (54 genes)
cit00410 [list] [network] beta-Alanine metabolism (45 genes)
cit00770 [list] [network] Pantothenate and CoA biosynthesis (35 genes)
GO BP
GO:0006598 [list] [network] polyamine catabolic process  (3 genes)  IEA  
GO CC
GO:0005777 [list] [network] peroxisome  (65 genes)  IEA  
GO MF
GO:0046592 [list] [network] polyamine oxidase activity  (4 genes)  IEA  
Protein XP_006481938.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  chlo_mito 1,  cysk_nucl 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_006481938.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006481938.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102624788

.
ath-u.5
for
PAO2

.
ath-u.5
for
PAO3

.
ath-u.5
for
PAO4

.
gma-u.5
for
100782576

.
gma-u.5
for
100785056

.
gma-u.5
for
100790521

.
vvi-u.5
for
100250153

.
vvi-u.5
for
100245491

.
ppo-u.5
for
7468334

.
ppo-u.5
for
7468715

.
ppo-u.5
for
7464825

.
mtr-u.5
for
25490550

.
mtr-u.5
for
11426561

.
mtr-u.5
for
11435419

.
sly-u.5
for
101252005

.
sly-u.5
for
101264170

.
sly-u.5
for
101260014

.
osa-u.5
for
4337046

.
osa-u.5
for
4337359

.
osa-u.5
for
4337360

.
zma-u.5
for
101027113

.
zma-u.5
for
100384522

.
zma-u.5
for
100191603

.


Ortholog ID: 1306
Species ath ath gma gma sly sly osa osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol PAO4 PAO2 LOC100791090 LOC100798561 LOC101264170 LOC101252005 LOC4337046 LOC4337359 LOC100384522 LOC103852299 LOC103866687 LOC100250153 LOC100245491 LOC7468334 LOC7464825 LOC11426561 LOC25490550 LOC123055127 LOC123055128 LOC123428404 LOC123427789 LOC107945473 LOC107944271 LOC106441217 LOC106381329 CHLRE_10g447767v5 LOC8082588 LOC8082590 LOC102598184 LOC102591553 LOC102624788 LOC102627867 LOC100840588 LOC100824039 LOC107799822 LOC107800087
Function* polyamine oxidase 4 polyamine oxidase 2 probable polyamine oxidase 4 polyamine oxidase 2 probable polyamine oxidase 4 polyamine oxidase 2-like polyamine oxidase 3-like probable polyamine oxidase 2 uncharacterized LOC100384522 probable polyamine oxidase 4 polyamine oxidase 2 probable polyamine oxidase 4 polyamine oxidase 2 probable polyamine oxidase 4 polyamine oxidase 2 probable polyamine oxidase 4 polyamine oxidase 2 polyamine oxidase 5 polyamine oxidase 4 polyamine oxidase 5 polyamine oxidase 3 polyamine oxidase 2 probable polyamine oxidase 4 probable polyamine oxidase 4 probable polyamine oxidase 4 uncharacterized protein probable polyamine oxidase 2 probable polyamine oxidase 4 probable polyamine oxidase 2 probable polyamine oxidase 4 probable polyamine oxidase 4 polyamine oxidase 2-like probable polyamine oxidase 4 probable polyamine oxidase 2 polyamine oxidase 2 polyamine oxidase 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ath01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00330 Arginine and proline metabolism 3
ath01200 Carbon metabolism 2
ath04141 Protein processing in endoplasmic reticulum 2
ath00480 Glutathione metabolism 2
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04120 Ubiquitin mediated proteolysis 2
gma03015 mRNA surveillance pathway 2
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00410 beta-Alanine metabolism 2
gma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00330 Arginine and proline metabolism 2
zma00410 beta-Alanine metabolism 2
zma00770 Pantothenate and CoA biosynthesis 2
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 4
bra01230 Biosynthesis of amino acids 4
bra00330 Arginine and proline metabolism 3
bra00410 beta-Alanine metabolism 3
bra00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 3
ppo03018 RNA degradation 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo04075 Plant hormone signal transduction 2
ppo00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 4
ppo00260 Glycine, serine and threonine metabolism 2
ppo00350 Tyrosine metabolism 2
ppo00360 Phenylalanine metabolism 2
ppo00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 3
mtr00330 Arginine and proline metabolism 2
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 6
tae00410 beta-Alanine metabolism 6
tae00770 Pantothenate and CoA biosynthesis 6
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 6
tae00410 beta-Alanine metabolism 6
tae00770 Pantothenate and CoA biosynthesis 6
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 2
hvu00330 Arginine and proline metabolism 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 2
bna00410 beta-Alanine metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 2
bna00410 beta-Alanine metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
sbi04712 Circadian rhythm - plant 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 7
sot04075 Plant hormone signal transduction 6
sot00230 Purine metabolism 2
sot01232 Nucleotide metabolism 2
sot00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00460 Cyanoamino acid metabolism 4
bdi00500 Starch and sucrose metabolism 4
bdi00999 Biosynthesis of various plant secondary metabolites 4
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00410 beta-Alanine metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
nta00906 Carotenoid biosynthesis 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 4
nta00410 beta-Alanine metabolism 4
nta00770 Pantothenate and CoA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842894 818904 100791090 100798561 101264170 101252005 4337046 4337359 100384522 103852299 103866687 100250153 100245491 7468334 7464825 11426561 25490550 123055127 123055128 123428404 123427789 107945473 107944271 106441217 106381329 5724032 8082588 8082590 102598184 102591553 102624788 102627867 100840588 100824039 107799822 107800087
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