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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102625860   cytochrome c6, chloroplastic 
 ath-u.5   CYTC6A   Cytochrome c 
 gma-u.5   100797820   cytochrome c6, chloroplastic 
 gma-u.5   100500456   uncharacterized LOC100500456 
 vvi-u.5   100250897   cytochrome c6, chloroplastic 
 ppo-u.5   18105957   cytochrome c6, chloroplastic 
 mtr-u.5   11444053   cytochrome c6, chloroplastic 
 sly-u.5   101255756   cytochrome c6, chloroplastic 
 osa-u.5   4343634   cytochrome c6, chloroplastic 
 zma-u.5   100382419   cytochrome c6 

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Top 50 coexpressed genes to 102625860 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102625860 (cit-r.1 coexpression data)

CoexMap"102625860"


citLOC102625860 | Entrez gene ID : 102625860    
Species cit ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00195 [list] [network] Photosynthesis (73 genes)
GO BP
GO CC
GO MF
GO:0009055 [list] [network] electron transfer activity  (83 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (362 genes)  IEA  
GO:0020037 [list] [network] heme binding  (408 genes)  IEA  
Protein XP_006468459.2 [sequence] [blastp]
XP_006468460.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1  (predict for XP_006468459.2)
chlo 6,  nucl 2,  cyto 1,  extr 1  (predict for XP_006468460.2)
Subcellular
localization
TargetP
chlo 5  (predict for XP_006468459.2)
scret 5  (predict for XP_006468460.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102625860

.
ath-u.5
for
CYTC6A

.
gma-u.5
for
100797820

.
gma-u.5
for
100500456

.
vvi-u.5
for
100250897

.
ppo-u.5
for
18105957

.
mtr-u.5
for
11444053

.
sly-u.5
for
101255756

.
osa-u.5
for
4343634

.
zma-u.5
for
100382419

.


Ortholog ID: 9141
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol CYTC6A LOC100797820 LOC100500456 LOC101255756 LOC4343634 LOC100382419 LOC103848470 LOC100250897 LOC18105957 LOC11444053 LOC123044516 LOC123049126 LOC123429836 LOC107963406 LOC107900395 LOC125575701 LOC106381695 CHLRE_16g670950v5 LOC8056352 LOC102601345 LOC102625860 LOC100829962 LOC107769124 LOC107809446
Function* Cytochrome c cytochrome c6, chloroplastic uncharacterized LOC100500456 cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6 cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic-like cytochrome c6, chloroplastic uncharacterized protein cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic cytochrome c6, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo01240 Biosynthesis of cofactors 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 6
tae01200 Carbon metabolism 6
tae00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03040 Spliceosome 4
nta00195 Photosynthesis 2
nta03050 Proteasome 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834535 100797820 100500456 101255756 4343634 100382419 103848470 100250897 18105957 11444053 123044516 123049126 123429836 107963406 107900395 125575701 106381695 5717695 8056352 102601345 102625860 100829962 107769124 107809446
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