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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102626587   uncharacterized LOC102626587 
 ath-u.5   AT2G45700   sterile alpha motif (SAM) domain-containing protein 
 bra-r.6   103866228   DNA cross-link repair 1A protein 
 ghi-r.1   107961635   DNA cross-link repair protein SNM1 
 ghi-r.1   107901016   DNA cross-link repair protein SNM1 
 bna-r.1   106394261   DNA cross-link repair 1A protein 
 bna-r.1   106452169   DNA cross-link repair protein SNM1 
 gma-u.5   100816321   DNA cross-link repair protein SNM1 
 vvi-u.5   100256089   uncharacterized LOC100256089 
 mtr-u.5   11433501   DNA cross-link repair protein SNM1 
 sly-u.5   101266356   uncharacterized LOC101266356 
 sot-r.1   102596611   uncharacterized LOC102596611 
 nta-r.1   107817206   uncharacterized LOC107817206 
 nta-r.1   107799239   uncharacterized LOC107799239 
 osa-u.5   4347162   uncharacterized LOC4347162 
 zma-u.5   103647460   uncharacterized LOC103647460 
 tae-r.2   123121547   uncharacterized LOC123121547 
 tae-r.2   123111983   uncharacterized LOC123111983 
 tae-r.2   123103764   uncharacterized LOC123103764 
 hvu-r.1   123397531   uncharacterized LOC123397531 
 sbi-r.1   8062739   uncharacterized LOC8062739 
 bdi-r.1   100843196   uncharacterized LOC100843196 
 cre-r.1   CHLRE_09g399907v5   uncharacterized protein 

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Top 50 coexpressed genes to 102626587 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102626587 (cit-r.1 coexpression data)

CoexMap"102626587"


citLOC102626587 | Entrez gene ID : 102626587    
Species cit ath bra ghi bna gma vvi mtr sly sot nta osa zma tae hvu sbi bdi cre ppo
Paralog 1 1 1 2 2 1 1 1 1 1 2 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031848 [list] [network] protection from non-homologous end joining at telomere  (5 genes)  IEA  
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (12 genes)  IEA  
GO:0036297 [list] [network] interstrand cross-link repair  (13 genes)  IEA  
GO CC
GO MF
GO:0035312 [list] [network] 5'-3' DNA exonuclease activity  (9 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (33 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006474528.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 3  (predict for XP_006474528.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006474528.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102626587
ath-u.5
for
AT2G45700
bra-r.6
for
103866228
ghi-r.1
for
107961635
ghi-r.1
for
107901016
bna-r.1
for
106394261
bna-r.1
for
106452169
gma-u.5
for
100816321
vvi-u.5
for
100256089
mtr-u.5
for
11433501
sly-u.5
for
101266356
sot-r.1
for
102596611
nta-r.1
for
107817206
nta-r.1
for
107799239
osa-u.5
for
4347162
zma-u.5
for
103647460
tae-r.2
for
123121547
tae-r.2
for
123111983
tae-r.2
for
123103764
hvu-r.1
for
123397531
sbi-r.1
for
8062739
bdi-r.1
for
100843196
cre-r.1
for
CHLRE_09g399907v5


Ortholog ID: 10722
Species cit ath bra ghi ghi bna bna gma vvi mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102626587 AT2G45700 LOC103866228 LOC107961635 LOC107901016 LOC106394261 LOC106452169 LOC100816321 LOC100256089 LOC11433501 LOC101266356 LOC102596611 LOC107817206 LOC107799239 LOC4347162 LOC103647460 LOC123121547 LOC123111983 LOC123103764 LOC123397531 LOC8062739 LOC100843196 CHLRE_09g399907v5
Function* uncharacterized LOC102626587 sterile alpha motif (SAM) domain-containing protein DNA cross-link repair 1A protein DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair 1A protein DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 uncharacterized LOC100256089 DNA cross-link repair protein SNM1 uncharacterized LOC101266356 uncharacterized LOC102596611 uncharacterized LOC107817206 uncharacterized LOC107799239 uncharacterized LOC4347162 uncharacterized LOC103647460 uncharacterized LOC123121547 uncharacterized LOC123111983 uncharacterized LOC123103764 uncharacterized LOC123397531 uncharacterized LOC8062739 uncharacterized LOC100843196 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03040 Spliceosome 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 6
gma01232 Nucleotide metabolism 6
gma03030 DNA replication 5
gma03440 Homologous recombination 3
gma00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 4
nta00240 Pyrimidine metabolism 4
nta00480 Glutathione metabolism 4
nta01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 3
zma03015 mRNA surveillance pathway 2
zma03460 Fanconi anemia pathway 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102626587 819178 103866228 107961635 107901016 106394261 106452169 100816321 100256089 11433501 101266356 102596611 107817206 107799239 4347162 103647460 123121547 123111983 123103764 123397531 8062739 100843196 5720686
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