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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102627316   meiotic recombination protein DMC1 homolog 
 ath-u.5   DMC1   DNA repair (Rad51) family protein 
 ppo-u.5   7498054   meiotic recombination protein DMC1 homolog 
 sly-u.5   101259196   meiotic recombination protein DMC1 homolog 
 osa-u.5   4351482   meiotic recombination protein DMC1 homolog 
 osa-u.5   4349763   meiotic recombination protein DMC1 homolog B 
 zma-u.5   100273470   meiotic recombination protein DMC1 

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Top 50 coexpressed genes to 102627316 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102627316 (cit-r.1 coexpression data)

CoexMap"102627316"


citLOC102627316 | Entrez gene ID : 102627316    
Species cit ath ppo sly osa zma tae hvu vvi bra ghi mtr sbi bdi nta gma bna cre sot
Paralog 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000730 [list] [network] DNA recombinase assembly  (3 genes)  IEA  
GO:0042148 [list] [network] DNA strand invasion  (3 genes)  IEA  
GO:0006312 [list] [network] mitotic recombination  (9 genes)  IEA  
GO:0070192 [list] [network] chromosome organization involved in meiotic cell cycle  (18 genes)  IEA  
GO:0007131 [list] [network] reciprocal meiotic recombination  (31 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (225 genes)  IEA  
GO CC
GO:0000794 [list] [network] condensed nuclear chromosome  (15 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0000150 [list] [network] DNA strand exchange activity  (2 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (21 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (53 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (373 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (454 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1864 genes)  IEA  
Protein XP_006489468.2 [sequence] [blastp]
XP_024948029.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_006489468.2)
cyto 4,  cysk 3,  mito 1,  cysk_plas 1  (predict for XP_024948029.2)
Subcellular
localization
TargetP
other 8  (predict for XP_006489468.2)
other 8  (predict for XP_024948029.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102627316
ath-u.5
for
DMC1
ppo-u.5
for
7498054
sly-u.5
for
101259196
osa-u.5
for
4351482
osa-u.5
for
4349763
zma-u.5
for
100273470


Ortholog ID: 8959
Species cit ath bra ghi ghi bna bna ppo sly sot nta nta osa osa zma tae hvu sbi sbi cre
Symbol LOC102627316 DMC1 LOC103834269 LOC107929171 LOC107928479 LOC106363427 LOC106436497 LOC7498054 LOC101259196 LOC102594747 LOC107762441 LOC107810216 LOC4349763 LOC4351482 LOC100273470 LOC123111208 LOC123395860 LOC8071400 LOC8078314 CHLRE_02g141846v5
Function* meiotic recombination protein DMC1 homolog DNA repair (Rad51) family protein meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog B meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 meiotic recombination protein DMC1 homolog B meiotic recombination protein DMC1 homolog B meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 3
ghi03460 Fanconi anemia pathway 3
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04070 Phosphatidylinositol signaling system 4
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04070 Phosphatidylinositol signaling system 4
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00460 Cyanoamino acid metabolism 3
sot00500 Starch and sucrose metabolism 3
sot00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01210 2-Oxocarboxylic acid metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu00020 Citrate cycle (TCA cycle) 2
hvu00480 Glutathione metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102627316 821860 103834269 107929171 107928479 106363427 106436497 7498054 101259196 102594747 107762441 107810216 4349763 4351482 100273470 123111208 123395860 8071400 8078314 5726032
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