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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6  103841356  protein SHI RELATED SEQUENCE 6 
 bra-r.6  103863234  protein SHI RELATED SEQUENCE 6 
 ghi-r.1  107896388  protein SHI RELATED SEQUENCE 6 
 ghi-r.1  107915152  protein SHI RELATED SEQUENCE 6 
 bna-r.1  106414258  protein SHI RELATED SEQUENCE 6-like 
 bna-r.1  106415444  protein SHI RELATED SEQUENCE 5-like 
 bna-r.1  106431378  protein SHI RELATED SEQUENCE 6 
 gma-u.5  100790311  protein LATERAL ROOT PRIMORDIUM 1 
 ppo-u.5  7460242  protein SHI RELATED SEQUENCE 6 
 ppo-u.5  18094338  protein LATERAL ROOT PRIMORDIUM 1 
 mtr-u.5  11445184  protein LATERAL ROOT PRIMORDIUM 1 

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Top 50 coexpressed genes to 103841356 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103841356 (bra-r.6 coexpression data)

CoexMap"102628509"


citLOC102628509 | Entrez gene ID : 102628509
Species bra ghi bna gma ppo mtr sbi osa sot sly cit tae ath hvu vvi zma cre nta bdi
Paralog 2 2 3 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (192 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (825 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1476 genes)  IEA  
Protein XP_006494070.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006494070.2)
Subcellular
localization
TargetP
other 8  (predict for XP_006494070.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bra-r.6
for
103841356


bra-r.6
for
103863234


ghi-r.1
for
107896388


ghi-r.1
for
107915152


bna-r.1
for
106414258


bna-r.1
for
106415444


bna-r.1
for
106431378


gma-u.5
for
100790311


ppo-u.5
for
7460242


ppo-u.5
for
18094338


mtr-u.5
for
11445184



Ortholog ID: 13436
Species bra bra ghi ghi bna bna bna gma ppo ppo mtr
Symbol LOC103841356 LOC103863234 LOC107896388 LOC107915152 LOC106415444 LOC106431378 LOC106413880 LOC100790311 LOC7460242 LOC18094338 LOC11445184
Function* protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 5-like protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6-like protein LATERAL ROOT PRIMORDIUM 1 protein SHI RELATED SEQUENCE 6 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103841356 103863234 107896388 107915152 106415444 106431378 106413880 100790311 7460242 18094338 11445184
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