ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	CER4	Jojoba acyl CoA reductase-related male sterility protein
vvi-u.5	100259719	fatty acyl-CoA reductase 3
ppo-u.5	7479040	fatty acyl-CoA reductase 3
ppo-u.5	7474948	fatty acyl-CoA reductase 3
mtr-u.5	11406049	fatty acyl-CoA reductase 3
sly-u.5	101267260	fatty acyl-CoA reductase 2, chloroplastic-like
sly-u.5	101262598	fatty acyl-CoA reductase 2, chloroplastic
sly-u.5	101260469	fatty acyl-CoA reductase 2, chloroplastic-like
osa-u.5	4347887	putative fatty acyl-CoA reductase 7
osa-u.5	4346301	fatty acyl-CoA reductase 1
osa-u.5	4335562	fatty acyl-CoA reductase 1
zma-u.5	103643196	fatty acyl-CoA reductase 1
zma-u.5	103639542	fatty acyl-CoA reductase 2, chloroplastic
zma-u.5	100285021	male sterility protein 2

Annotation

functional annotation

KEGG

cit00073 [list] [network] Cutin, suberine and wax biosynthesis (32 genes)

cit04146 [list] [network] Peroxisome (89 genes)

GO BP

GO:0010345 [list] [network] suberin biosynthetic process	(9 genes)	IEA
GO:0035336 [list] [network] long-chain fatty-acyl-CoA metabolic process	(9 genes)	IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(4772 genes)

IEA

GO MF

GO:0080019 [list] [network] alcohol-forming very long-chain fatty acyl-CoA reductase activity

(9 genes)

IEA

Protein

XP_006492870.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 2, pero 1, golg 1

(predict for XP_006492870.1)

Subcellular
localization
TargetP

other 6, mito 3

(predict for XP_006492870.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for CER4	vvi-u.5 for 100259719	ppo-u.5 for 7479040	ppo-u.5 for 7474948	mtr-u.5 for 11406049	sly-u.5 for 101267260	sly-u.5 for 101262598	sly-u.5 for 101260469	osa-u.5 for 4347887	osa-u.5 for 4346301	osa-u.5 for 4335562	zma-u.5 for 103643196	zma-u.5 for 103639542	zma-u.5 for 100285021

Ortholog

Ortholog ID: 138

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

FAR4

Function^*

fatty acyl-CoA reductase 3-like

fatty acyl-CoA reductase 2, chloroplastic

fatty acid reductase 4

fatty acyl-CoA reductase 6, chloroplastic

fatty acyl-CoA reductase 3

alcohol-forming fatty acyl-CoA reductase

fatty acyl-CoA reductase 3

fatty acyl-CoA reductase 6, chloroplastic

fatty acyl-CoA reductase 3

alcohol-forming fatty acyl-CoA reductase

fatty acyl-CoA reductase 2, chloroplastic

fatty acyl-CoA reductase 3-like

fatty acyl-CoA reductase 2-like

fatty acyl-CoA reductase 2, chloroplastic

fatty acyl-CoA reductase 3-like

fatty acyl-CoA reductase 1

male sterility protein 2

fatty acyl-CoA reductase 2, chloroplastic

probable fatty acyl-CoA reductase 4

fatty acyl-CoA reductase 1-like

fatty acyl-CoA reductase 1

probable fatty acyl-CoA reductase 4

fatty acyl-CoA reductase 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	4
ath04146	Peroxisome	2
ath00940	Phenylpropanoid biosynthesis	2
ath02010	ABC transporters	2
ath04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00196	Photosynthesis - antenna proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	5
bna04146	Peroxisome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	3
bna00073	Cutin, suberine and wax biosynthesis	2
bna04146	Peroxisome	2
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00073	Cutin, suberine and wax biosynthesis	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	4
ppo00062	Fatty acid elongation	3
ppo04626	Plant-pathogen interaction	3
ppo00564	Glycerophospholipid metabolism	2
ppo02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00940	Phenylpropanoid biosynthesis	2
ppo00941	Flavonoid biosynthesis	2
ppo00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	4
sly04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00904	Diterpenoid biosynthesis	4
nta01212	Fatty acid metabolism	3
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2
nta00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04146	Peroxisome	5
osa00071	Fatty acid degradation	4
osa01212	Fatty acid metabolism	4
osa03018	RNA degradation	3
osa00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	3
zma00910	Nitrogen metabolism	2
zma00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	5
tae00073	Cutin, suberine and wax biosynthesis	3
tae04146	Peroxisome	3
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00410	beta-Alanine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	2
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	4
sbi04075	Plant hormone signal transduction	2
sbi00940	Phenylpropanoid biosynthesis	2
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00073	Cutin, suberine and wax biosynthesis	2
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03018	RNA degradation	3

Expression

Expression pattern

Entrez Gene ID^*

102617900

102627670

823579

103830063

107932424

107889164

106361089

106356741

100788994

100259719

7479040

7479041

25483583

101262598

101255436

102593077

107765773

107819278

107278422

103643196

100285021

123084801

123172362

123412496

8063746

8072774

100827426

100822349

66052839

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CER4 (ath-u.5 coexpression data)

Top 50 enrichment test to CER4 (ath-u.5 coexpression data)


Species	ath	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	gma	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	2	1	3	3	3	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CER4 (ath-u.5 coexpression data)

Top 50 enrichment test to CER4 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**