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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5  AT1G09900  Pentatricopeptide repeat (PPR-like) superfamily protein 
 bra-r.6  103871770  pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1  107941798  pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1  121230306  pentatricopeptide repeat-containing protein At1g09900 
 bna-r.1  106346231  pentatricopeptide repeat-containing protein At1g09900 
 bna-r.1  106400864  pentatricopeptide repeat-containing protein At1g09900-like 
 gma-u.5  100790449  pentatricopeptide repeat-containing protein At1g09900 
 gma-u.5  100791459  pentatricopeptide repeat-containing protein At1g09900 
 vvi-u.5  100267729  pentatricopeptide repeat-containing protein At1g09900 
 ppo-u.5  7461840  pentatricopeptide repeat-containing protein At1g09900 
 sot-r.1  102587797  pentatricopeptide repeat-containing protein At1g09900 
 sot-r.1  102593853  pentatricopeptide repeat-containing protein At1g09900-like 
 nta-r.1  107787111  uncharacterized LOC107787111 
 nta-r.1  107825473  uncharacterized LOC107825473 

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Top 50 coexpressed genes to AT1G09900 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G09900 (ath-u.5 coexpression data)

CoexMap"102629926"


citLOC102629926 | Entrez gene ID : 102629926
Species ath bra ghi bna gma vvi ppo sot nta cit tae bdi sbi cre osa hvu sly mtr zma
Paralog 1 1 2 2 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006472405.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cyto_nucl 4,  nucl 1,  cysk 1  (predict for XP_006472405.2)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_006472405.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ath-u.5
for
AT1G09900


bra-r.6
for
103871770


ghi-r.1
for
107941798


ghi-r.1
for
121230306


bna-r.1
for
106346231


bna-r.1
for
106400864


gma-u.5
for
100790449


gma-u.5
for
100791459


vvi-u.5
for
100267729


ppo-u.5
for
7461840


sot-r.1
for
102587797


sot-r.1
for
102593853


nta-r.1
for
107787111


nta-r.1
for
107825473



Ortholog ID: 13211
Species ath bra ghi ghi bna bna gma gma vvi ppo sot sot nta nta
Symbol AT1G09900 LOC103871770 LOC107941798 LOC121230306 LOC106346231 LOC106400864 LOC100790449 LOC100791459 LOC100267729 LOC7461840 LOC102587797 LOC102593853 LOC107787111 LOC107825473
Function* Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900-like uncharacterized LOC107787111 uncharacterized LOC107825473
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837522 103871770 107941798 121230306 106346231 106400864 100790449 100791459 100267729 7461840 102587797 102593853 107787111 107825473
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