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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102630129   thylakoidal processing peptidase 1, chloroplastic-like 
 ath-u.5   TPP   thylakoid processing peptide 
 ath-u.5   Plsp2A   Peptidase S24/S26A/S26B/S26C family protein 
 bra-r.6   103865037   thylakoidal processing peptidase 1, chloroplastic 
 bra-r.6   103843490   probable thylakoidal processing peptidase 2, chloroplastic 
 ghi-r.1   107940319   probable thylakoidal processing peptidase 2, chloroplastic 
 ghi-r.1   107940692   probable thylakoidal processing peptidase 2, chloroplastic 
 ghi-r.1   107935597   probable thylakoidal processing peptidase 2, chloroplastic 
 bna-r.1   125578637   probable thylakoidal processing peptidase 2, chloroplastic 
 bna-r.1   106348401   thylakoidal processing peptidase 1, chloroplastic 
 bna-r.1   106367460   thylakoidal processing peptidase 1, chloroplastic-like 
 gma-u.5   100817525   probable thylakoidal processing peptidase 2, chloroplastic 
 gma-u.5   100802457   thylakoidal processing peptidase 1, chloroplastic 
 vvi-u.5   100243802   probable thylakoidal processing peptidase 2, chloroplastic-like 
 ppo-u.5   18104955   uncharacterized LOC18104955 
 mtr-u.5   11417737   probable thylakoidal processing peptidase 2, chloroplastic 
 mtr-u.5   11431369   thylakoidal processing peptidase 1, chloroplastic 
 sly-u.5   101263904   thylakoidal processing peptidase 1, chloroplastic-like 
 sot-r.1   102587949   thylakoidal processing peptidase 1, chloroplastic-like 
 nta-r.1   107822399   thylakoidal processing peptidase 1, chloroplastic 
 nta-r.1   107804945   thylakoidal processing peptidase 1, chloroplastic-like 
 osa-u.5   4347239   thylakoidal processing peptidase 1, chloroplastic 
 zma-u.5   100284377   uncharacterized LOC100284377 
 zma-u.5   100283156   uncharacterized LOC100283156 
 zma-u.5   100502377   uncharacterized LOC100502377 
 tae-r.2   123113426   probable thylakoidal processing peptidase 2, chloroplastic 
 tae-r.2   123103944   thylakoidal processing peptidase 1, chloroplastic 
 tae-r.2   123105133   probable thylakoidal processing peptidase 2, chloroplastic 
 hvu-r.1   123398564   thylakoidal processing peptidase 1, chloroplastic-like 
 hvu-r.1   123452382   probable thylakoidal processing peptidase 2, chloroplastic 
 sbi-r.1   8062772   thylakoidal processing peptidase 1, chloroplastic 
 sbi-r.1   8083972   probable thylakoidal processing peptidase 2, chloroplastic 
 bdi-r.1   100845632   uncharacterized LOC100845632 

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Top 50 coexpressed genes to 102630129 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102630129 (cit-r.1 coexpression data)

CoexMap"102630129"


citLOC102630129 | Entrez gene ID : 102630129    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 2 3 3 2 1 1 2 1 1 2 1 3 3 2 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03060 [list] [network] Protein export (53 genes)
GO BP
GO:0010027 [list] [network] thylakoid membrane organization  (14 genes)  IEA  
GO:0006465 [list] [network] signal peptide processing  (17 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (72 genes)  IEA  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (121 genes)  IEA  
Protein XP_006473394.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_006473394.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_006473394.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102630129
ath-u.5
for
TPP
ath-u.5
for
Plsp2A
bra-r.6
for
103865037
bra-r.6
for
103843490
ghi-r.1
for
107940319
ghi-r.1
for
107940692
ghi-r.1
for
107935597
bna-r.1
for
125578637
bna-r.1
for
106348401
bna-r.1
for
106367460
gma-u.5
for
100817525
gma-u.5
for
100802457
vvi-u.5
for
100243802
ppo-u.5
for
18104955
mtr-u.5
for
11417737
mtr-u.5
for
11431369
sly-u.5
for
101263904
sot-r.1
for
102587949
nta-r.1
for
107822399
nta-r.1
for
107804945
osa-u.5
for
4347239
zma-u.5
for
100284377
zma-u.5
for
100283156
zma-u.5
for
100502377
tae-r.2
for
123113426
tae-r.2
for
123103944
tae-r.2
for
123105133
hvu-r.1
for
123398564
hvu-r.1
for
123452382
sbi-r.1
for
8062772
sbi-r.1
for
8083972
bdi-r.1
for
100845632


Ortholog ID: 4354
Species cit ath ath bra bra ghi ghi ghi bna bna bna gma gma vvi ppo mtr mtr sly sot nta nta osa zma zma zma tae tae tae hvu hvu sbi sbi bdi
Symbol LOC102630129 TPP Plsp2A LOC103843490 LOC103844003 LOC107940319 LOC107940692 LOC107935597 LOC125578637 LOC106348401 LOC106419826 LOC100817525 LOC100802457 LOC100243802 LOC18104955 LOC11417737 LOC11431369 LOC101263904 LOC102587949 LOC107822399 LOC107804945 LOC4347239 LOC100284377 LOC100283156 LOC100502377 LOC123103944 LOC123105133 LOC123121713 LOC123398564 LOC123452382 LOC8062772 LOC8083972 LOC100845632
Function* thylakoidal processing peptidase 1, chloroplastic-like thylakoid processing peptide Peptidase S24/S26A/S26B/S26C family protein probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic-like uncharacterized LOC18104955 probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic thylakoidal processing peptidase 1, chloroplastic-like thylakoidal processing peptidase 1, chloroplastic-like thylakoidal processing peptidase 1, chloroplastic thylakoidal processing peptidase 1, chloroplastic-like thylakoidal processing peptidase 1, chloroplastic uncharacterized LOC100284377 uncharacterized LOC100283156 uncharacterized LOC100502377 thylakoidal processing peptidase 1, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic thylakoidal processing peptidase 1, chloroplastic-like probable thylakoidal processing peptidase 2, chloroplastic thylakoidal processing peptidase 1, chloroplastic probable thylakoidal processing peptidase 2, chloroplastic uncharacterized LOC100845632
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 3
ath00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
bna04626 Plant-pathogen interaction 3
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00270 Cysteine and methionine metabolism 3
gma00020 Citrate cycle (TCA cycle) 3
gma03060 Protein export 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
gma03083 Polycomb repressive complex 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01230 Biosynthesis of amino acids 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 4
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
mtr04075 Plant hormone signal transduction 3
mtr04626 Plant-pathogen interaction 3
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 6
nta04075 Plant hormone signal transduction 4
nta04146 Peroxisome 3
nta04626 Plant-pathogen interaction 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta04146 Peroxisome 3
nta04626 Plant-pathogen interaction 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04626 Plant-pathogen interaction 4
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
tae00591 Linoleic acid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
tae03060 Protein export 3
tae00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00591 Linoleic acid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
tae04626 Plant-pathogen interaction 3
tae03060 Protein export 3
tae00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102630129 817595 837198 103843490 103844003 107940319 107940692 107935597 125578637 106348401 106419826 100817525 100802457 100243802 18104955 11417737 11431369 101263904 102587949 107822399 107804945 4347239 100284377 100283156 100502377 123103944 123105133 123121713 123398564 123452382 8062772 8083972 100845632
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