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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102630907   berberine bridge enzyme-like 15 
 cit-r.1   102613244   tetrahydroberberine oxidase-like 
 cit-r.1   102612334   tetrahydroberberine oxidase-like 
 cit-r.1   102609852   tetrahydroberberine oxidase-like 
 ath-u.5   AT1G26380   FAD-binding Berberine family protein 
 ath-u.5   AT1G26390   FAD-binding Berberine family protein 
 bra-r.6   108869423   berberine bridge enzyme-like 4 
 ghi-r.1   107930198   berberine bridge enzyme-like 18 
 ghi-r.1   107925098   berberine bridge enzyme-like 7 
 ghi-r.1   107925099   berberine bridge enzyme-like 8 
 bna-r.1   106407225   berberine bridge enzyme-like 12 
 bna-r.1   106407151   berberine bridge enzyme-like 13 
 bna-r.1   106402215   berberine bridge enzyme-like 7 
 gma-u.5   100775353   berberine bridge enzyme-like 13 
 vvi-u.5   100248870   tetrahydroberberine oxidase 
 vvi-u.5   100246147   berberine bridge enzyme-like 21 
 vvi-u.5   100245607   berberine bridge enzyme-like 21 
 ppo-u.5   7480408   berberine bridge enzyme-like 13 
 ppo-u.5   112324786   berberine bridge enzyme-like 8 
 mtr-u.5   11420001   berberine bridge enzyme-like 21 
 sly-u.5   101246398   berberine bridge enzyme-like 22 
 sly-u.5   101264571   berberine bridge enzyme-like 21 
 sot-r.1   102594583   tetrahydrocannabinolic acid synthase-like 
 sot-r.1   102594246   tetrahydrocannabinolic acid synthase-like 
 sot-r.1   102595242   cannabidiolic acid synthase-like 
 nta-r.1   107766044   berberine bridge enzyme-like 22 
 nta-r.1   107766440   berberine bridge enzyme-like 21 
 zma-u.5   100276794   uncharacterized LOC100276794 
 tae-r.2   123051687   berberine bridge enzyme-like Cyn d 4 
 tae-r.2   123069860   berberine bridge enzyme-like Cyn d 4 
 tae-r.2   123092748   berberine bridge enzyme-like Cyn d 4 
 hvu-r.1   123413019   berberine bridge enzyme-like Cyn d 4 
 hvu-r.1   123421037   berberine bridge enzyme-like Cyn d 4 
 sbi-r.1   8073826   berberine bridge enzyme-like 13 
 sbi-r.1   8069230   berberine bridge enzyme-like 18 
 bdi-r.1   100833798   berberine bridge enzyme-like 28 
 bdi-r.1   100828152   berberine bridge enzyme-like 18 
 bdi-r.1   100826011   berberine bridge enzyme-like 27 
 cre-r.1   CHLRE_09g397253v5   uncharacterized protein 

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Top 50 coexpressed genes to 102630907 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102630907 (cit-r.1 coexpression data)

CoexMap"102630907"


citLOC102630907 | Entrez gene ID : 102630907    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi cre osa
Paralog 4 2 1 3 3 1 3 2 1 2 3 2 1 3 2 2 3 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00940 [list] [network] Phenylpropanoid biosynthesis (169 genes)
GO BP
GO CC
GO MF
GO:0071949 [list] [network] FAD binding  (86 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (1222 genes)  IEA  
Protein XP_006490201.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 3,  chlo_mito 3  (predict for XP_006490201.2)
Subcellular
localization
TargetP
scret 8  (predict for XP_006490201.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102630907
cit-r.1
for
102613244
cit-r.1
for
102612334
cit-r.1
for
102609852
ath-u.5
for
AT1G26380
ath-u.5
for
AT1G26390
bra-r.6
for
108869423
ghi-r.1
for
107930198
ghi-r.1
for
107925098
ghi-r.1
for
107925099
bna-r.1
for
106407225
bna-r.1
for
106407151
bna-r.1
for
106402215
gma-u.5
for
100775353
vvi-u.5
for
100248870
vvi-u.5
for
100246147
vvi-u.5
for
100245607
ppo-u.5
for
7480408
ppo-u.5
for
112324786
mtr-u.5
for
11420001
sly-u.5
for
101246398
sly-u.5
for
101264571
sot-r.1
for
102594583
sot-r.1
for
102594246
sot-r.1
for
102595242
nta-r.1
for
107766044
nta-r.1
for
107766440
zma-u.5
for
100276794
tae-r.2
for
123051687
tae-r.2
for
123069860
tae-r.2
for
123092748
hvu-r.1
for
123413019
hvu-r.1
for
123421037
sbi-r.1
for
8073826
sbi-r.1
for
8069230
bdi-r.1
for
100833798
bdi-r.1
for
100828152
bdi-r.1
for
100826011
cre-r.1
for
CHLRE_09g397253v5


Ortholog ID: 8
Species cit ath ath bra bra bra ghi ghi ghi bna bna gma gma vvi vvi vvi ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa zma zma tae hvu hvu hvu sbi sbi bdi cre
Symbol LOC102623495 AT1G26380 AT1G26390 LOC103865354 LOC103850258 LOC103867418 LOC107914760 LOC107925005 LOC107930381 LOC106375689 LOC125576459 LOC100800519 LOC100797188 LOC100243731 LOC100264985 LOC100253961 LOC18109453 LOC11407647 LOC11422989 LOC112421407 LOC101254965 LOC101263376 LOC101256448 LOC102594583 LOC102586155 LOC107763225 LOC107807516 LOC107807513 LOC4341254 LOC4341253 LOC103629842 LOC103629835 LOC123160322 LOC123413019 LOC123411227 LOC123409696 LOC8073826 LOC110430759 LOC100833798 CHLRE_09g397253v5
Function* tetrahydroberberine oxidase-like FAD-binding Berberine family protein FAD-binding Berberine family protein berberine bridge enzyme-like 15 berberine bridge enzyme-like 1 berberine bridge enzyme-like 15 berberine bridge enzyme-like 18 berberine bridge enzyme-like 7 berberine bridge enzyme-like 26 berberine bridge enzyme-like 22 berberine bridge enzyme-like 13 berberine bridge enzyme-like 13 berberine bridge enzyme-like 21 tetrahydroberberine oxidase berberine bridge enzyme-like 21 tetrahydroberberine oxidase berberine bridge enzyme-like 13 berberine bridge enzyme-like 21 berberine bridge enzyme-like 22 berberine bridge enzyme-like 21 berberine bridge enzyme-like 28 tetrahydroberberine oxidase-like monolignol oxidoreductase AtBBE-like 13 tetrahydrocannabinolic acid synthase-like reticuline oxidase-like protein tetrahydroberberine oxidase berberine bridge enzyme-like 22 berberine bridge enzyme-like 22 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like 27 berberine bridge enzyme-like 27 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like Cyn d 4 berberine bridge enzyme-like 13 berberine bridge enzyme-like 18 berberine bridge enzyme-like 28 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00600 Sphingolipid metabolism 2
ghi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 4
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00940 Phenylpropanoid biosynthesis 4
ppo04016 MAPK signaling pathway - plant 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 4
osa01200 Carbon metabolism 3
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 4
sbi00052 Galactose metabolism 4
sbi00260 Glycine, serine and threonine metabolism 2
sbi00310 Lysine degradation 2
sbi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102623495 839180 839181 103865354 103850258 103867418 107914760 107925005 107930381 106375689 125576459 100800519 100797188 100243731 100264985 100253961 18109453 11407647 11422989 112421407 101254965 101263376 101256448 102594583 102586155 107763225 107807516 107807513 4341254 4341253 103629842 103629835 123160322 123413019 123411227 123409696 8073826 110430759 100833798 66054712
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