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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100801988   putative cyclin-A3-1 
 gma-u.5   100793436   putative cyclin-A3-1 
 mtr-u.5   25489917   putative cyclin-A3-1 
 mtr-u.5   11413042   putative cyclin-A3-1 
 mtr-u.5   25489919   putative cyclin-A3-1 
 ppo-u.5   18104821   putative cyclin-A3-1 
 ath-u.5   CYCA3;4   CYCLIN A3;4 
 vvi-u.5   100250548   putative cyclin-A3-1 
 sly-u.5   101255181   G2/mitotic-specific cyclin C13-1-like 
 sly-u.5   101255776   G2/mitotic-specific cyclin C13-1-like 
 sly-u.5   101258635   putative cyclin-A3-1 
 osa-u.5   4352642   cyclin-A3-2-like 
 osa-u.5   4333422   cyclin-A3-1 
 zma-u.5   103650257   cyclin-A3-2-like 
 zma-u.5   100216646   cyclin superfamily protein, putative 
 zma-u.5   100280674   cyclin-A2 

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Top 50 coexpressed genes to 100801988 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100801988 (gma-u.5 coexpression data)

CoexMap"102660622"


gmaLOC102660622 | Entrez gene ID : 102660622    
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 3 1 1 1 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0044772 [list] [network] mitotic cell cycle phase transition  (92 genes)  IEA  
GO:0000079 [list] [network] regulation of cyclin-dependent protein serine/threonine kinase activity  (102 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (157 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity  (100 genes)  IEA  
Protein XP_040867358.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  chlo 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_040867358.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040867358.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100801988
gma-u.5
for
100793436
mtr-u.5
for
25489917
mtr-u.5
for
11413042
mtr-u.5
for
25489919
ppo-u.5
for
18104821
ath-u.5
for
CYCA3;4
vvi-u.5
for
100250548
sly-u.5
for
101255181
sly-u.5
for
101255776
sly-u.5
for
101258635
osa-u.5
for
4352642
osa-u.5
for
4333422
zma-u.5
for
103650257
zma-u.5
for
100216646
zma-u.5
for
100280674


Ortholog ID: 1000
Species mtr ath ath bra bra vvi ghi ghi bna bna cit cit sly sly sot nta nta zma zma tae hvu sbi bdi bdi
Symbol LOC25489921 CYCA3;1 CYCA3;2 LOC103827996 LOC103868712 LOC100250548 LOC107917057 LOC107938357 LOC106371865 LOC106426410 LOC102621044 LOC102611949 LOC101255181 LOC101267520 LOC102585677 LOC107824914 LOC107804529 LOC100216646 LOC100280138 LOC123119622 LOC123395514 LOC8074274 LOC100833039 LOC100845231
Function* putative cyclin-A3-1 Cyclin A3;1 cyclin-dependent protein kinase 3;2 putative cyclin-A3-1 cyclin-A3-2 putative cyclin-A3-1 cyclin-A3-1 cyclin-A3-1 cyclin-A3-4 cyclin-A3-2 putative cyclin-A3-1 putative cyclin-A3-1 G2/mitotic-specific cyclin C13-1-like putative cyclin-A3-1 putative cyclin-A3-1 G2/mitotic-specific cyclin C13-1-like putative cyclin-A3-1 cyclin superfamily protein, putative uncharacterized LOC100280138 cyclin-A3-2 cyclin-A3-2-like cyclin-A3-2 cyclin-A3-1 cyclin-A3-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03430 Mismatch repair 3
mtr03030 DNA replication 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03440 Homologous recombination 5
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 3
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 6
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 3
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 4
bra00240 Pyrimidine metabolism 3
bra01232 Nucleotide metabolism 3
bra00230 Purine metabolism 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00730 Thiamine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00240 Pyrimidine metabolism 4
sly01232 Nucleotide metabolism 4
sly00230 Purine metabolism 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 7
sot03460 Fanconi anemia pathway 5
sot03440 Homologous recombination 4
sot03420 Nucleotide excision repair 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 5
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma00240 Pyrimidine metabolism 3
zma01232 Nucleotide metabolism 3
zma00230 Purine metabolism 2
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 6
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
bdi03410 Base excision repair 2
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25489921 834324 841124 103827996 103868712 100250548 107917057 107938357 106371865 106426410 102621044 102611949 101255181 101267520 102585677 107824914 107804529 100216646 100280138 123119622 123395514 8074274 100833039 100845231
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