ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	102661961	uncharacterized LOC102661961
gma-r.7	102661961	uncharacterized LOC102661961
gma-u.5	102661068	uncharacterized LOC102661068
gma-u.5	100809377	uncharacterized LOC100809377
gma-u.5	100807168	uncharacterized LOC100807168
mtr-u.5	120577156	uncharacterized LOC120577156
mtr-u.5	11442030	uncharacterized LOC11442030
ppo-u.5	18110907	uncharacterized LOC18110907
ppo-u.5	7475960	uncharacterized LOC7475960
ppo-u.5	18098688	uncharacterized LOC18098688
ath-u.5	AT2G47820	arginine-glutamic acid dipeptide repeat protein
vvi-u.5	100254594	uncharacterized LOC100254594
vvi-u.5	100245979	uncharacterized LOC100245979
vvi-u.5	104879764	uncharacterized LOC104879764
sly-u.5	101254833	uncharacterized LOC101254833
osa-u.5	4332820	uncharacterized LOC4332820
osa-u.5	4343640	uncharacterized LOC4343640
zma-u.5	103634765	uncharacterized LOC103634765
zma-u.5	100381518	uncharacterized LOC100381518
zma-u.5	100279470	uncharacterized LOC100279470

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(5531 genes)

IEA

GO MF

GO:0003714 [list] [network] transcription corepressor activity

(50 genes)

IEA

Protein

XP_006586214.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, vacu 2

(predict for XP_006586214.1)

Subcellular
localization
TargetP

other 8

(predict for XP_006586214.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 102661961	gma-r.7 for 102661961	gma-u.5 for 102661068	gma-u.5 for 100809377	gma-u.5 for 100807168	mtr-u.5 for 120577156	mtr-u.5 for 11442030	ppo-u.5 for 18110907	ppo-u.5 for 7475960	ppo-u.5 for 18098688	ath-u.5 for AT2G47820	vvi-u.5 for 100254594	vvi-u.5 for 100245979	vvi-u.5 for 104879764	sly-u.5 for 101254833	osa-u.5 for 4332820	osa-u.5 for 4343640	zma-u.5 for 103634765	zma-u.5 for 100381518	zma-u.5 for 100279470

Ortholog

Ortholog ID: 1969

Species

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100807168

uncharacterized LOC18098688

uncharacterized LOC7481747

arginine-glutamic acid dipeptide repeat protein

uncharacterized LOC103858259

uncharacterized LOC100254594

uncharacterized LOC104879764

uncharacterized LOC107908673

uncharacterized LOC107893648

uncharacterized LOC106438363

uncharacterized LOC111214058

uncharacterized LOC102624452

uncharacterized LOC102629830

uncharacterized LOC101254833

uncharacterized LOC102604919

uncharacterized LOC107761674

uncharacterized LOC107774544

uncharacterized LOC4332820

uncharacterized LOC4343640

uncharacterized LOC103634765

uncharacterized LOC100381518

uncharacterized LOC123091973

uncharacterized LOC123085836

uncharacterized LOC123448652

uncharacterized LOC123448654

uncharacterized LOC8081767

uncharacterized LOC8082297

uncharacterized LOC100828743

uncharacterized LOC100836195

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo00300	Lysine biosynthesis	2
ppo01230	Biosynthesis of amino acids	2
ppo03030	DNA replication	2
ppo03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	4
sly04626	Plant-pathogen interaction	3
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00561	Glycerolipid metabolism	2
bdi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

100807168

18098688

7481747

819394

103858259

100254594

104879764

107908673

107893648

106438363

111214058

102624452

102629830

101254833

102604919

107761674

107774544

4332820

4343640

103634765

100381518

123091973

123085836

123448652

123448654

8081767

8082297

100828743

100836195

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102661961 (gma-u.5 coexpression data)

Top 50 enrichment test to 102661961 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	5	2	3	1	3	1	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102661961 (gma-u.5 coexpression data)

Top 50 enrichment test to 102661961 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**