ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	102664997	pentatricopeptide repeat-containing protein At2g13600
mtr-u.5	25502895	pentatricopeptide repeat-containing protein At2g13600

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(407 genes)

IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(10455 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding	(2019 genes)	IEA
GO:0005515 [list] [network] protein binding	(7243 genes)	IEA

Protein

XP_014621792.1 [sequence] [blastp]

Subcellular
localization
wolf

cysk 6, nucl 1, cyto 1, cyto_nucl 1

(predict for XP_014621792.1)

Subcellular
localization
TargetP

other 9

(predict for XP_014621792.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 102664997	mtr-u.5 for 25502895

Ortholog ID: 24409

Species

gma

mtr

Symbol

LOC102664997

LOC25502895

Function^*

pentatricopeptide repeat-containing protein At2g13600

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

102664997

25502895


Species	gma	mtr	vvi	bdi	bna	ppo	sbi	ghi	cit	hvu	sot	sly	nta	osa	tae	zma	cre	ath	bra
Paralog	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102664997 (gma-u.5 coexpression data)

Top 50 enrichment test to 102664997 (gma-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102664997 (gma-u.5 coexpression data)

Top 50 enrichment test to 102664997 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**