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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100782735   putative pentatricopeptide repeat-containing protein At3g01580 
 mtr-u.5   25484737   putative pentatricopeptide repeat-containing protein At3g01580 
 ghi-r.1   107955838   pentatricopeptide repeat-containing protein At2g03380, mitochondrial 
 ghi-r.1   107954396   pentatricopeptide repeat-containing protein At2g03380, mitochondrial 
 zma-u.5   103634411   pentatricopeptide repeat-containing protein At4g33990 
 tae-r.2   123051944   pentatricopeptide repeat-containing protein At4g33990 
 tae-r.2   123044068   pentatricopeptide repeat-containing protein At4g33990 
 hvu-r.1   123425135   putative pentatricopeptide repeat-containing protein At3g01580 
 bdi-r.1   100822282   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 

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Top 50 coexpressed genes to 100782735 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100782735 (gma-u.5 coexpression data)

CoexMap""


gmaLOC102670373 | Entrez gene ID : 102670373    
Species gma mtr ghi zma tae hvu bdi nta cit sot sly ath osa sbi bra cre bna vvi ppo
Paralog 1 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At1g71460, chloroplastic
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006590149.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_006590149.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006590149.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100782735


mtr-u.5
for
25484737


ghi-r.1
for
107955838


ghi-r.1
for
107954396


zma-u.5
for
103634411


tae-r.2
for
123051944


tae-r.2
for
123044068


hvu-r.1
for
123425135


bdi-r.1
for
100822282

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Ortholog ID: 14083
Species gma mtr ghi ghi zma tae tae hvu bdi
Symbol LOC100782735 LOC25484737 LOC107955838 LOC107954396 LOC103634411 LOC123051944 LOC123044068 LOC123425135 LOC100822282
Function* putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 pentatricopeptide repeat-containing protein At2g03380, mitochondrial pentatricopeptide repeat-containing protein At2g03380, mitochondrial pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 putative pentatricopeptide repeat-containing protein At3g01580 pentatricopeptide repeat-containing protein At3g57430, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100782735 25484737 107955838 107954396 103634411 123051944 123044068 123425135 100822282
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