Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   Opaque11   Opaque endosperm 11 
 osa-u.5   4335859   transcription factor bHLH95 
 osa-u.5   4335858   transcription factor bHLH95 
 tae-r.2   123130357   transcription factor bHLH95 
 tae-r.2   123133804   transcription factor bHLH95-like 
 bdi-r.1   100821939   transcription factor bHLH95 
 bdi-r.1   100822559   transcription factor bHLH95 
 gma-u.5   ZOU-2   bHLH transcription factor ZOU-2 
 bra-r.6   103868796   transcription factor bHLH95 
 vvi-u.5   100266006   transcription factor bHLH95 

close


Top 50 coexpressed genes to Opaque11 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to Opaque11 (zma-u.5 coexpression data)

CoexMap"103630854"


zmaLOC103630854 | Entrez gene ID : 103630854    
Species zma osa tae bdi gma bra vvi hvu sot sly nta bna ppo cre mtr sbi ath ghi cit
Paralog 1 2 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009960 [list] [network] endosperm development  (3 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (663 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
Protein XP_008650124.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  pero 1  (predict for XP_008650124.2)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for XP_008650124.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
Opaque11
osa-u.5
for
4335859
osa-u.5
for
4335858
tae-r.2
for
123130357
tae-r.2
for
123133804
bdi-r.1
for
100821939
bdi-r.1
for
100822559
gma-u.5
for
ZOU-2
bra-r.6
for
103868796
vvi-u.5
for
100266006


Ortholog ID: 3060
Species zma osa osa tae tae bdi bdi gma bra vvi ghi ghi
Symbol Opaque11 LOC4335859 LOC4335858 LOC123130357 LOC123133804 LOC100821939 LOC100822559 ZOU-2 LOC103868796 LOC100266006 LOC121212214 LOC107894279
Function* Opaque endosperm 11 transcription factor bHLH95 transcription factor bHLH95 transcription factor bHLH95 transcription factor bHLH95-like transcription factor bHLH95 transcription factor bHLH95 bHLH transcription factor ZOU-2 transcription factor bHLH95 transcription factor bHLH95 transcription factor bHLH95 transcription factor bHLH95
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 109851609 4335859 4335858 123130357 123133804 100821939 100822559 100810704 103868796 100266006 121212214 107894279
The preparation time of this page was 0.1 [sec].