ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103635996	probable anion transporter 4, chloroplastic
zma-r.6	103635996	probable anion transporter 4, chloroplastic
zma-u.5	100281620	sialin
zma-u.5	100191676	uncharacterized LOC100191676
sbi-r.1	8078115	probable anion transporter 1, chloroplastic
sbi-r.1	8075480	probable anion transporter 4, chloroplastic
osa-u.5	PHT4;1	probable anion transporter 1, chloroplastic
osa-u.5	PHT4;4	probable anion transporter 4, chloroplastic
tae-r.2	123061125	probable anion transporter 1, chloroplastic
tae-r.2	123078202	probable anion transporter 1, chloroplastic
tae-r.2	123069715	probable anion transporter 1, chloroplastic
hvu-r.1	123446803	probable anion transporter 4, chloroplastic
hvu-r.1	123443601	probable anion transporter 1, chloroplastic
bdi-r.1	100842035	probable anion transporter 1, chloroplastic
bdi-r.1	100832197	probable anion transporter 4, chloroplastic
ath-u.5	PHT4;1	phosphate transporter 4;1
ath-u.5	ANTR2	Major facilitator superfamily protein
gma-u.5	100793618	ascorbate transporter, chloroplastic
gma-u.5	100792104	sodium-dependent phosphate transport protein 1, chloroplastic
gma-u.5	100787020	sodium-dependent phosphate transport protein 1, chloroplastic
sly-u.5	101266861	sodium-dependent phosphate transport protein 1, chloroplastic
sly-u.5	101263257	ascorbate transporter, chloroplastic
bra-r.6	103858874	ascorbate transporter, chloroplastic
bra-r.6	103836924	ascorbate transporter, chloroplastic
bra-r.6	103868018	sodium-dependent phosphate transport protein 1, chloroplastic
vvi-u.5	100246658	sodium-dependent phosphate transport protein 1, chloroplastic
vvi-u.5	100255061	ascorbate transporter, chloroplastic
ppo-u.5	7481487	sodium-dependent phosphate transport protein 1, chloroplastic
ppo-u.5	7478542	probable anion transporter 1, chloroplastic
ppo-u.5	7496975	ascorbate transporter, chloroplastic
mtr-u.5	11443407	ascorbate transporter, chloroplastic
mtr-u.5	11430128	ascorbate transporter, chloroplastic
mtr-u.5	25490824	sodium-dependent phosphate transport protein 1, chloroplastic
ghi-r.1	107952772	ascorbate transporter, chloroplastic
ghi-r.1	121232290	ascorbate transporter, chloroplastic
ghi-r.1	107928744	sodium-dependent phosphate transport protein 1, chloroplastic
bna-r.1	106451518	sodium-dependent phosphate transport protein 1, chloroplastic
bna-r.1	111215709	sodium-dependent phosphate transport protein 1, chloroplastic
bna-r.1	106384139	ascorbate transporter, chloroplastic
sot-r.1	102599205	ascorbate transporter, chloroplastic
sot-r.1	102598682	sodium-dependent phosphate transport protein 1, chloroplastic
cit-r.1	102630913	ascorbate transporter, chloroplastic
cit-r.1	102613898	sodium-dependent phosphate transport protein 1, chloroplastic
cit-r.1	127901166	ascorbate transporter, chloroplastic-like
nta-r.1	107827552	ascorbate transporter, chloroplastic
nta-r.1	107790630	sodium-dependent phosphate transport protein 1, chloroplastic-like
nta-r.1	107787093	ascorbate transporter, chloroplastic
cre-r.1	CHLRE_08g379550v5	uncharacterized protein

Top 50 coexpressed genes to 103635996 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103635996 (zma-u.5 coexpression data)

CoexMap"103635996"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(1100 genes)

IEA

GO CC

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(1374 genes)

IEA

Protein

XP_008656580.1 [sequence] [blastp]
XP_008656581.1 [sequence] [blastp]
XP_035817713.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, chlo 2, E.R. 1, golg 1	(predict for XP_008656580.1)
plas 5, chlo 2, E.R. 1, golg 1	(predict for XP_008656581.1)
plas 5, chlo 2, E.R. 1, golg 1	(predict for XP_035817713.1)

Subcellular
localization
TargetP

mito 4	(predict for XP_008656580.1)
mito 4	(predict for XP_008656581.1)
mito 4	(predict for XP_035817713.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103635996	zma-r.6 for 103635996	zma-u.5 for 100281620	zma-u.5 for 100191676	sbi-r.1 for 8078115	sbi-r.1 for 8075480	osa-u.5 for PHT4;1	osa-u.5 for PHT4;4	tae-r.2 for 123061125	tae-r.2 for 123078202	tae-r.2 for 123069715	hvu-r.1 for 123446803	hvu-r.1 for 123443601	bdi-r.1 for 100842035	bdi-r.1 for 100832197	ath-u.5 for PHT4;1	ath-u.5 for ANTR2	gma-u.5 for 100793618	gma-u.5 for 100792104	gma-u.5 for 100787020	sly-u.5 for 101266861	sly-u.5 for 101263257	bra-r.6 for 103858874	bra-r.6 for 103836924	bra-r.6 for 103868018	vvi-u.5 for 100246658	vvi-u.5 for 100255061	ppo-u.5 for 7481487	ppo-u.5 for 7478542	ppo-u.5 for 7496975	mtr-u.5 for 11443407	mtr-u.5 for 11430128	mtr-u.5 for 25490824	ghi-r.1 for 107952772	ghi-r.1 for 121232290	ghi-r.1 for 107928744	bna-r.1 for 106451518	bna-r.1 for 111215709	bna-r.1 for 106384139	sot-r.1 for 102599205	sot-r.1 for 102598682	cit-r.1 for 102630913	cit-r.1 for 102613898	cit-r.1 for 127901166	nta-r.1 for 107827552	nta-r.1 for 107790630	nta-r.1 for 107787093	cre-r.1 for CHLRE_08g379550v5

Ortholog

Ortholog ID: 2453

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

PHT4;1

PHT4;4

PHT4;1

ANTR2

Function^*

probable anion transporter 4, chloroplastic

sialin

uncharacterized LOC100191676

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

probable anion transporter 1, chloroplastic

probable anion transporter 4, chloroplastic

phosphate transporter 4;1

Major facilitator superfamily protein