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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103643378   protein ROOT PRIMORDIUM DEFECTIVE 1 
 zma-r.6   103643378   protein ROOT PRIMORDIUM DEFECTIVE 1 
 zma-m.5   103643378   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sbi-r.1   8065172   protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.5   4349088   protein ROOT PRIMORDIUM DEFECTIVE 1 
 tae-r.2   123181305   protein ROOT PRIMORDIUM DEFECTIVE 1 
 tae-r.2   123124821   protein ROOT PRIMORDIUM DEFECTIVE 1 
 tae-r.2   123048623   protein ROOT PRIMORDIUM DEFECTIVE 1 
 hvu-r.1   123434368   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bdi-r.1   100834624   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ath-u.5   AT1G06440   Ubiquitin carboxyl-terminal hydrolase family protein 
 gma-u.5   100808404   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sly-u.5   101250659   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bra-r.6   103844040   protein ROOT PRIMORDIUM DEFECTIVE 1 
 vvi-u.5   100261573   protein ROOT PRIMORDIUM DEFECTIVE 1 
 mtr-u.5   25489191   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ghi-r.1   107948533   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sot-r.1   102604148   protein ROOT PRIMORDIUM DEFECTIVE 1 
 cit-r.1   102620508   protein ROOT PRIMORDIUM DEFECTIVE 1 
 nta-r.1   107827006   protein ROOT PRIMORDIUM DEFECTIVE 1 
 nta-r.1   107795981   protein ROOT PRIMORDIUM DEFECTIVE 1 

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Top 50 coexpressed genes to 103643378 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103643378 (zma-u.5 coexpression data)

CoexMap"103643378"


zmaLOC103643378 | Entrez gene ID : 103643378    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi mtr ghi sot cit nta ppo cre bna
Paralog 3 1 1 3 1 1 1 1 1 1 1 1 1 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein XP_008664764.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_008664764.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_008664764.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103643378
zma-r.6
for
103643378
zma-m.5
for
103643378
sbi-r.1
for
8065172
osa-u.5
for
4349088
tae-r.2
for
123181305
tae-r.2
for
123124821
tae-r.2
for
123048623
hvu-r.1
for
123434368
bdi-r.1
for
100834624
ath-u.5
for
AT1G06440
gma-u.5
for
100808404
sly-u.5
for
101250659
bra-r.6
for
103844040
vvi-u.5
for
100261573
mtr-u.5
for
25489191
ghi-r.1
for
107948533
sot-r.1
for
102604148
cit-r.1
for
102620508
nta-r.1
for
107827006
nta-r.1
for
107795981


Ortholog ID: 10429
Species zma sbi osa tae tae tae hvu bdi ath gma sly bra vvi mtr ghi sot cit nta nta
Symbol LOC103643378 LOC8065172 LOC4349088 LOC123181305 LOC123124821 LOC123048623 LOC123434368 LOC100834624 AT1G06440 LOC100808404 LOC101250659 LOC103844040 LOC100261573 LOC25489191 LOC107948533 LOC102604148 LOC102620508 LOC107827006 LOC107795981
Function* protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 Ubiquitin carboxyl-terminal hydrolase family protein protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103643378 8065172 4349088 123181305 123124821 123048623 123434368 100834624 837156 100808404 101250659 103844040 100261573 25489191 107948533 102604148 102620508 107827006 107795981
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