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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103643932   SWI/SNF complex subunit SWI3D 
 zma-r.6   103643932   SWI/SNF complex subunit SWI3D 
 zma-u.5   103625928   SWI/SNF complex subunit SWI3D 
 osa-u.5   4333941   SWI/SNF complex subunit SWI3D 
 osa-u.5   4334928   SWI/SNF complex subunit SWI3D 
 ath-u.5   CHB3   DNA-binding family protein 
 gma-u.5   100799723   SWI/SNF complex subunit SWI3D 
 gma-u.5   100786881   SWI/SNF complex subunit SWI3D 
 sly-u.5   SWI3D   SWI/SNF complex subunit SWI3D 
 vvi-u.5   100855339   SWI/SNF complex subunit SWI3D 
 ppo-u.5   7456382   SWI/SNF complex subunit SWI3D 
 ppo-u.5   7469985   SWI/SNF complex subunit SWI3D 
 mtr-u.5   11441086   SWI/SNF complex subunit SWI3D 

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Top 50 coexpressed genes to 103643932 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103643932 (zma-u.5 coexpression data)

CoexMap"103643932"


zmaLOC103643932 | Entrez gene ID : 103643932      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03082 [list] [network] ATP-dependent chromatin remodeling (89 genes)
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008665323.1 [sequence] [blastp]
XP_008665324.1 [sequence] [blastp]
XP_035820260.1 [sequence] [blastp]
XP_035820261.1 [sequence] [blastp]
XP_035820262.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_008665323.1)
nucl 10  (predict for XP_008665324.1)
nucl 7,  cyto 1,  mito 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_035820260.1)
nucl 7,  cyto 1,  mito 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_035820261.1)
nucl 7,  cyto 1,  mito 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_035820262.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_008665323.1)
chlo 9  (predict for XP_008665324.1)
other 7  (predict for XP_035820260.1)
other 7  (predict for XP_035820261.1)
other 7  (predict for XP_035820262.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103643932
zma-r.6
for
103643932
zma-u.5
for
103625928
osa-u.5
for
4333941
osa-u.5
for
4334928
ath-u.5
for
CHB3
gma-u.5
for
100799723
gma-u.5
for
100786881
sly-u.5
for
SWI3D
vvi-u.5
for
100855339
ppo-u.5
for
7456382
ppo-u.5
for
7469985
mtr-u.5
for
11441086


Ortholog ID: 6632
Species zma zma sbi sbi osa osa tae tae hvu bdi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC103643932 LOC103625928 LOC8063359 LOC8065962 LOC4334928 LOC4333941 LOC123095930 LOC123087059 LOC123447589 LOC100842810 CHB3 LOC100786881 LOC100799723 SWI3D LOC103834415 LOC103837926 LOC100855339 LOC7456382 LOC7469985 LOC11441086 LOC107949076 LOC107927945 LOC106354692 LOC106434471 LOC102582052 LOC102609330 LOC107793442 LOC107828862
Function* SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D DNA-binding family protein SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D SWI/SNF complex subunit SWI3D-like SWI/SNF complex subunit SWI3D
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 5
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
tae00480 Glutathione metabolism 3
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03082 ATP-dependent chromatin remodeling 3
tae00270 Cysteine and methionine metabolism 2
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04120 Ubiquitin mediated proteolysis 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03040 Spliceosome 4
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103643932 103625928 8063359 8065962 4334928 4333941 123095930 123087059 123447589 100842810 829594 100786881 100799723 101265486 103834415 103837926 100855339 7456382 7469985 11441086 107949076 107927945 106354692 106434471 102582052 102609330 107793442 107828862
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