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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103646444   DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 
 zma-r.6   103646444   DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 
 osa-u.5   9267691   DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 
 ath-u.5   AT1G58060   RNA helicase family protein 
 gma-u.5   100788401   DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 
 sly-u.5   101259204   DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 
 vvi-u.5   100247318   DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 
 ppo-u.5   18098308   DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 
 mtr-u.5   25494381   DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 
 mtr-u.5   120575832   DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 

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Top 50 coexpressed genes to 103646444 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103646444 (zma-u.5 coexpression data)

CoexMap"103646444"


zmaLOC103646444 | Entrez gene ID : 103646444      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005622 [list] [network] intracellular anatomical structure  (9110 genes)  IEA  
GO MF
GO:0004386 [list] [network] helicase activity  (173 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2473 genes)  IEA  
Protein XP_008669398.1 [sequence] [blastp]
XP_008669399.1 [sequence] [blastp]
XP_008669400.1 [sequence] [blastp]
XP_035821163.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  plas 3,  cysk_nucl 3  (predict for XP_008669398.1)
nucl 5,  plas 3,  chlo 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_008669399.1)
nucl 5,  plas 2,  chlo 1,  cysk_plas 1,  mito_plas 1  (predict for XP_008669400.1)
nucl 5,  plas 3,  chlo 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_035821163.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_008669398.1)
chlo 9  (predict for XP_008669399.1)
chlo 9  (predict for XP_008669400.1)
chlo 9  (predict for XP_035821163.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103646444

.
zma-r.6
for
103646444

.
osa-u.5
for
9267691

.
ath-u.5
for
AT1G58060

.
gma-u.5
for
100788401

.
sly-u.5
for
101259204

.
vvi-u.5
for
100247318

.
ppo-u.5
for
18098308

.
mtr-u.5
for
25494381

.
mtr-u.5
for
120575832

.


Ortholog ID: 9853
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G58060 LOC100788401 LOC101259204 LOC9267691 LOC103646444 LOC103838638 LOC100247318 LOC18098308 LOC120575832 LOC25494381 LOC123053333 LOC123045486 LOC123426744 LOC107934804 LOC107925443 LOC125575247 LOC106366606 CHLRE_06g266416v5 LOC8080301 LOC102595882 LOC102612145 LOC100839482 LOC107822421 LOC107802592
Function* RNA helicase family protein DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic-like DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic-like DExH-box ATP-dependent RNA helicase DExH7, chloroplastic uncharacterized protein DExH-box ATP-dependent RNA helicase DExH7, chloroplastic ATP-dependent RNA helicase DHX36 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic DExH-box ATP-dependent RNA helicase DExH7, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03420 Nucleotide excision repair 3
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03015 mRNA surveillance pathway 2
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
tae03082 ATP-dependent chromatin remodeling 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04075 Plant hormone signal transduction 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 3
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 4
bna03430 Mismatch repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 2
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842173 100788401 101259204 9267691 103646444 103838638 100247318 18098308 120575832 25494381 123053333 123045486 123426744 107934804 107925443 125575247 106366606 66053632 8080301 102595882 102612145 100839482 107822421 107802592
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