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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103649543   Activating signal cointegrator 1 complex subunit 1 
 zma-r.6   103649543   Activating signal cointegrator 1 complex subunit 1 
 zma-m.5   103649543   Activating signal cointegrator 1 complex subunit 1 
 osa-u.5   4325894   uncharacterized LOC4325894 
 osa-u.5   4325893   uncharacterized LOC4325893 
 ath-u.5   AT3G16220   Putative eukaryotic LigT 
 ath-u.5   AT3G16230   Putative eukaryotic LigT 
 gma-u.5   100785531   uncharacterized LOC100785531 
 sly-u.5   101249781   uncharacterized LOC101249781 
 sly-u.5   101268850   uncharacterized LOC101268850 
 vvi-u.5   100266864   uncharacterized LOC100266864 
 ppo-u.5   7475086   uncharacterized LOC7475086 
 mtr-u.5   11420973   uncharacterized LOC11420973 

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Top 50 coexpressed genes to 103649543 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103649543 (zma-u.5 coexpression data)

CoexMap"103649543"


zmaLOC103649543 | Entrez gene ID : 103649543      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006307 [list] [network] DNA alkylation repair  (5 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
Protein XP_008673481.1 [sequence] [blastp]
XP_008673482.1 [sequence] [blastp]
XP_008673483.1 [sequence] [blastp]
XP_008673484.1 [sequence] [blastp]
XP_008673485.1 [sequence] [blastp]
XP_020406809.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_008673481.1)
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_008673482.1)
chlo 7,  chlo_mito 5,  mito 2  (predict for XP_008673483.1)
nucl 5,  cyto_nucl 3,  chlo 2,  mito 1  (predict for XP_008673484.1)
nucl 5,  cyto_nucl 3,  chlo 2,  mito 1  (predict for XP_008673485.1)
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_020406809.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_008673481.1)
mito 8  (predict for XP_008673482.1)
mito 8  (predict for XP_008673483.1)
other 4,  chlo 3  (predict for XP_008673484.1)
other 4,  chlo 3  (predict for XP_008673485.1)
mito 8  (predict for XP_020406809.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103649543

.
zma-r.6
for
103649543

.
zma-m.5
for
103649543

.
osa-u.5
for
4325894

.
osa-u.5
for
4325893

.
ath-u.5
for
AT3G16220

.
ath-u.5
for
AT3G16230

.
gma-u.5
for
100785531

.
sly-u.5
for
101249781

.
sly-u.5
for
101268850

.
vvi-u.5
for
100266864

.
ppo-u.5
for
7475086

.
mtr-u.5
for
11420973

.


Ortholog ID: 4548
Species ath ath gma sly sly osa osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT3G16220 AT3G16230 LOC100785531 LOC101268850 LOC101249781 LOC4325893 LOC4325894 LOC103649543 LOC103840105 LOC103840113 LOC100266864 LOC7475086 LOC11420973 LOC123060803 LOC123069365 LOC123443263 LOC107950695 LOC107889109 LOC106439436 LOC106358143 CHLRE_01g008000v5 LOC8078103 LOC102596069 LOC102605557 LOC102623371 LOC100837554 LOC107814231 LOC107802500
Function* Putative eukaryotic LigT Putative eukaryotic LigT uncharacterized LOC100785531 uncharacterized LOC101268850 uncharacterized LOC101249781 uncharacterized LOC4325893 uncharacterized LOC4325894 Activating signal cointegrator 1 complex subunit 1 uncharacterized LOC103840105 uncharacterized LOC103840113 uncharacterized LOC100266864 uncharacterized LOC7475086 uncharacterized LOC11420973 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 uncharacterized LOC107950695 uncharacterized LOC107889109 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 uncharacterized protein activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1 activating signal cointegrator 1 complex subunit 1-like uncharacterized LOC102623371 activating signal cointegrator 1 complex subunit 1 uncharacterized LOC107814231 uncharacterized LOC107802500
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820868 820869 100785531 101268850 101249781 4325893 4325894 103649543 103840105 103840113 100266864 7475086 11420973 123060803 123069365 123443263 107950695 107889109 106439436 106358143 5725856 8078103 102596069 102605557 102623371 100837554 107814231 107802500
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