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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100285694   gibberellin 2-oxidase 
 sbi-r.1   8080913   gibberellin 2-beta-dioxygenase 2 
 sbi-r.1   110430382   gibberellin 2-beta-dioxygenase 6-like 
 osa-u.5   9266994   gibberellin 2-beta-dioxygenase 2-like 
 hvu-r.1   123409385   gibberellin 2-beta-dioxygenase 2-like 
 bdi-r.1   100841118   gibberellin 2-beta-dioxygenase 6 
 ath-u.5   GA2OX6   gibberellin 2-oxidase 6 
 gma-u.5   GA2OX2   gibberellin 2-beta-dioxygenase 2 
 sly-u.5   101261151   gibberellin 2-beta-dioxygenase 2-like 
 sly-u.5   GA2ox3   gibberellin 2-oxidase 
 bra-r.6   103836654   gibberellin 2-beta-dioxygenase 6-like 
 bra-r.6   103844588   gibberellin 2-beta-dioxygenase 6 
 bra-r.6   103868699   gibberellin 2-beta-dioxygenase 4 
 vvi-u.5   100258599   gibberellin 2-beta-dioxygenase 2 
 mtr-u.5   25494132   gibberellin 2-beta-dioxygenase 2 
 mtr-u.5   11416786   gibberellin 2-beta-dioxygenase 2 
 ghi-r.1   107954380   gibberellin 2-beta-dioxygenase 2 
 ghi-r.1   107953039   gibberellin 2-beta-dioxygenase 2 
 ghi-r.1   107949483   gibberellin 2-beta-dioxygenase 2 
 bna-r.1   125595226   gibberellin 2-beta-dioxygenase 6-like 
 bna-r.1   106401876   gibberellin 2-beta-dioxygenase 6-like 
 sot-r.1   102592578   gibberellin 2-beta-dioxygenase 2-like 
 cit-r.1   102614515   gibberellin 2-beta-dioxygenase 2 
 cit-r.1   102630592   gibberellin 2-beta-dioxygenase 2-like 

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Top 50 coexpressed genes to 100285694 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100285694 (zma-u.5 coexpression data)

CoexMap"103651969"


zmaLOC103651969 | Entrez gene ID : 103651969      
Species zma sbi osa hvu bdi ath gma sly bra vvi mtr ghi bna sot cit ppo cre nta tae
Paralog 1 2 1 1 1 1 1 2 3 1 2 3 2 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00904 [list] [network] Diterpenoid biosynthesis (36 genes)
GO BP
GO CC
GO MF
Protein XP_008675855.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  mito 1,  pero 1  (predict for XP_008675855.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_008675855.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100285694
sbi-r.1
for
8080913
sbi-r.1
for
110430382
osa-u.5
for
9266994
hvu-r.1
for
123409385
bdi-r.1
for
100841118
ath-u.5
for
GA2OX6
gma-u.5
for
GA2OX2
sly-u.5
for
101261151
sly-u.5
for
GA2ox3
bra-r.6
for
103836654
bra-r.6
for
103844588
bra-r.6
for
103868699
vvi-u.5
for
100258599
mtr-u.5
for
25494132
mtr-u.5
for
11416786
ghi-r.1
for
107954380
ghi-r.1
for
107953039
ghi-r.1
for
107949483
bna-r.1
for
125595226
bna-r.1
for
106401876
sot-r.1
for
102592578
cit-r.1
for
102614515
cit-r.1
for
102630592


Ortholog ID: 1998
Species zma sbi sbi osa hvu bdi ath gma sly sly bra bra bra vvi ppo mtr mtr ghi ghi ghi bna bna sot cit cit nta nta
Symbol LOC100285694 LOC8080913 LOC110430382 LOC9266994 LOC123409385 LOC100841118 GA2OX6 GA2OX2 LOC101261151 GA2ox3 LOC103836654 LOC103844588 LOC103868699 LOC100258599 LOC7460479 LOC25494132 LOC11416786 LOC107936098 LOC107917072 LOC107946018 LOC125595226 LOC106401876 LOC102592578 LOC102614515 LOC102630592 LOC107758914 LOC107794008
Function* gibberellin 2-oxidase gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 6-like gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 6 gibberellin 2-oxidase 6 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2-like gibberellin 2-oxidase gibberellin 2-beta-dioxygenase 6-like gibberellin 2-beta-dioxygenase 6 gibberellin 2-beta-dioxygenase 4 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 6-like gibberellin 2-beta-dioxygenase 6-like gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa00270 Cysteine and methionine metabolism 2
osa00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
gma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 2
mtr00541 Biosynthesis of various nucleotide sugars 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi00380 Tryptophan metabolism 2
ghi00740 Riboflavin metabolism 2
ghi04142 Lysosome 2
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 4
ghi04142 Lysosome 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 3
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 3
nta00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100285694 8080913 110430382 9266994 123409385 100841118 839508 100779525 101261151 100134888 103836654 103844588 103868699 100258599 7460479 25494132 11416786 107936098 107917072 107946018 125595226 106401876 102592578 102614515 102630592 107758914 107794008
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