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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100280492   CDT1a protein 
 zma-u.5   100383008   CDT1-like protein a chloroplastic 
 zma-u.5   100274350   CDT1a protein 
 sbi-r.1   8079590   CDT1-like protein b 
 sbi-r.1   8067113   CDT1-like protein b 
 osa-u.5   4348970   CDT1-like protein b 
 tae-r.2   123122575   CDT1-like protein a, chloroplastic 
 tae-r.2   123181265   CDT1-like protein a, chloroplastic 
 tae-r.2   123047077   CDT1-like protein a, chloroplastic 
 hvu-r.1   123432511   CDT1-like protein a, chloroplastic 
 bdi-r.1   100827903   CDT1-like protein a, chloroplastic 
 gma-u.5   102670055   CDT1-like protein b 
 gma-u.5   100794715   CDT1-like protein a, chloroplastic 
 sly-u.5   101254874   CDT1-like protein a, chloroplastic 
 vvi-u.5   100244348   CDT1-like protein a, chloroplastic 
 ppo-u.5   7494374   CDT1-like protein a, chloroplastic 
 mtr-u.5   11422247   CDT1-like protein a, chloroplastic 
 sot-r.1   102579973   CDT1-like protein a, chloroplastic 
 nta-r.1   107776001   CDT1-like protein a, chloroplastic 
 nta-r.1   107829689   CDT1-like protein a, chloroplastic 

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Top 50 coexpressed genes to 100280492 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100280492 (zma-u.5 coexpression data)

CoexMap"103652203"


zmaLOC103652203 | Entrez gene ID : 103652203    
Species zma sbi osa tae hvu bdi gma sly vvi ppo mtr sot nta bna cre ath bra ghi cit
Paralog 3 2 1 3 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030174 [list] [network] regulation of DNA-templated DNA replication initiation  (6 genes)  IEA  
GO:0071163 [list] [network] DNA replication preinitiation complex assembly  (6 genes)  IEA  
GO:0000076 [list] [network] DNA replication checkpoint signaling  (17 genes)  IEA  
GO:0000278 [list] [network] mitotic cell cycle  (175 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0070182 [list] [network] DNA polymerase binding  (15 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2288 genes)  IEA  
Protein XP_020406493.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 3,  nucl 1,  mito 1,  plas 1,  mito_plas 1  (predict for XP_020406493.2)
Subcellular
localization
TargetP
other 4,  scret 3,  mito 3  (predict for XP_020406493.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100280492
zma-u.5
for
100383008
zma-u.5
for
100274350
sbi-r.1
for
8079590
sbi-r.1
for
8067113
osa-u.5
for
4348970
tae-r.2
for
123122575
tae-r.2
for
123181265
tae-r.2
for
123047077
hvu-r.1
for
123432511
bdi-r.1
for
100827903
gma-u.5
for
102670055
gma-u.5
for
100794715
sly-u.5
for
101254874
vvi-u.5
for
100244348
ppo-u.5
for
7494374
mtr-u.5
for
11422247
sot-r.1
for
102579973
nta-r.1
for
107776001
nta-r.1
for
107829689


Ortholog ID: 11843
Species zma zma sbi sbi osa tae tae tae hvu bdi gma gma sly vvi ppo mtr sot nta nta
Symbol LOC100280492 LOC100383008 LOC8079590 LOC8067113 LOC4348970 LOC123122575 LOC123181265 LOC123047077 LOC123432511 LOC100827903 LOC102670055 LOC100794715 LOC101254874 LOC100244348 LOC7494374 LOC11422247 LOC102579973 LOC107776001 LOC107829689
Function* CDT1a protein CDT1-like protein a chloroplastic CDT1-like protein b CDT1-like protein b CDT1-like protein b CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein b CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic CDT1-like protein a, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma03430 Mismatch repair 5
gma03410 Base excision repair 4
gma03420 Nucleotide excision repair 4
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03030 DNA replication 3
gma03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 3
vvi03440 Homologous recombination 3
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta00480 Glutathione metabolism 2
nta01232 Nucleotide metabolism 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta00480 Glutathione metabolism 2
nta01232 Nucleotide metabolism 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100280492 100383008 8079590 8067113 4348970 123122575 123181265 123047077 123432511 100827903 102670055 100794715 101254874 100244348 7494374 11422247 102579973 107776001 107829689
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