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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5  103653165  ferredoxin 
 zma-r.6  103653165  ferredoxin 
 zma-m.5  103653165  ferredoxin 
 zma-u.5  100382495  putative ferredoxin-4 chloroplastic 
 zma-u.5  541619  ferredoxin 2 
 zma-u.5  101027099  ferredoxin 1 
 sbi-r.1  8058532  ferredoxin-6, chloroplastic 
 sbi-r.1  8068511  ferredoxin 
 osa-u.5  9270637  ferredoxin, root R-B1 
 osa-u.5  4335779  uncharacterized LOC4335779 
 osa-u.5  4334701  ferredoxin-3, chloroplastic 
 tae-r.2  123079837  ferredoxin, root R-B1 
 tae-r.2  123045401  ferredoxin-1 
 tae-r.2  123057926  ferredoxin-6, chloroplastic 
 hvu-r.1  123407397  ferredoxin-like 
 hvu-r.1  123430255  ferredoxin-1-like 
 hvu-r.1  123394938  ferredoxin-3, chloroplastic-like 
 bdi-r.1  100838625  ferredoxin, root R-B1 
 bdi-r.1  100822000  ferredoxin-3, chloroplastic 
 bdi-r.1  100826463  ferredoxin 
 ath-u.5  FD3  ferredoxin 3 
 ath-u.5  FD1  ferredoxin 1 
 ath-u.5  FED A  2Fe-2S ferredoxin-like superfamily protein 
 gma-u.5  100500372  2Fe-2S ferredoxin-like superfamily protein 
 gma-u.5  100500583  uncharacterized LOC100500583 
 sly-u.5  101266472  ferredoxin, root R-B2 
 sly-u.5  101265784  ferredoxin 
 sly-u.5  101259118  ferredoxin, root R-B1 
 bra-r.6  103868066  ferredoxin-1, chloroplastic 
 bra-r.6  103864784  ferredoxin, root R-B2 
 bra-r.6  103858315  ferredoxin, root R-B2 
 vvi-u.5  100251971  ferredoxin, root R-B2 
 vvi-u.5  100266537  ferredoxin, root R-B1 
 vvi-u.5  100249080  ferredoxin 
 ppo-u.5  7471708  uncharacterized LOC7471708 
 ppo-u.5  7486907  ferredoxin, root R-B1 
 ppo-u.5  18098271  ferredoxin 
 mtr-u.5  11415783  ferredoxin, root R-B2 
 mtr-u.5  25485576  ferredoxin, root R-B1 
 mtr-u.5  25485574  ferredoxin, root R-B1 
 ghi-r.1  107938315  ferredoxin, root R-B2 
 ghi-r.1  121217651  ferredoxin-3, chloroplastic-like 
 ghi-r.1  107908764  ferredoxin-1 
 bna-r.1  106451716  ferredoxin-1, chloroplastic-like 
 bna-r.1  106350097  ferredoxin-1, chloroplastic 
 sot-r.1  102579702  ferredoxin, root R-B2-like 
 sot-r.1  102581844  ferredoxin, root R-B2-like 
 sot-r.1  102599819  ferredoxin-like 
 cit-r.1  102612391  ferredoxin, root R-B2-like 
 cit-r.1  102612085  ferredoxin, root R-B1-like 
 cit-r.1  102609071  ferredoxin 
 nta-r.1  107818034  ferredoxin, root R-B2 
 nta-r.1  107767245  ferredoxin, root R-B1 
 cre-r.1  CHLRE_17g700950v5  uncharacterized protein 
 cre-r.1  CHLRE_16g658400v5  uncharacterized protein 
 cre-r.1  CHLRE_14g626700v5  uncharacterized protein 

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Top 50 coexpressed genes to 103653165 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103653165 (zma-u.5 coexpression data)

CoexMap"103653165"


zmaLOC103653165 | Entrez gene ID : 103653165
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 6 2 3 3 3 3 3 2 3 3 3 3 3 3 2 3 3 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00195 [list] [network] Photosynthesis (146 genes)
GO BP
GO:0022900 [list] [network] electron transport chain  (159 genes)  IEA  
GO CC
GO MF
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (50 genes)  IEA  
GO:0009055 [list] [network] electron transfer activity  (187 genes)  IEA  
Protein XP_008678349.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_008678349.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_008678349.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

zma-u.5
for
103653165


zma-r.6
for
103653165


zma-m.5
for
103653165


zma-u.5
for
100382495


zma-u.5
for
541619


zma-u.5
for
101027099


sbi-r.1
for
8058532


sbi-r.1
for
8068511


osa-u.5
for
9270637


osa-u.5
for
4335779


osa-u.5
for
4334701


tae-r.2
for
123079837


tae-r.2
for
123045401


tae-r.2
for
123057926


hvu-r.1
for
123407397


hvu-r.1
for
123430255


hvu-r.1
for
123394938


bdi-r.1
for
100838625


bdi-r.1
for
100822000


bdi-r.1
for
100826463


ath-u.5
for
FD3


ath-u.5
for
FD1


ath-u.5
for
FED A


gma-u.5
for
100500372


gma-u.5
for
100500583


sly-u.5
for
101266472


sly-u.5
for
101265784


sly-u.5
for
101259118


bra-r.6
for
103868066


bra-r.6
for
103864784


bra-r.6
for
103858315


vvi-u.5
for
100251971


vvi-u.5
for
100266537


vvi-u.5
for
100249080


ppo-u.5
for
7471708


ppo-u.5
for
7486907


ppo-u.5
for
18098271


mtr-u.5
for
11415783


mtr-u.5
for
25485576


mtr-u.5
for
25485574


ghi-r.1
for
107938315


ghi-r.1
for
121217651


ghi-r.1
for
107908764


bna-r.1
for
106451716


bna-r.1
for
106350097


sot-r.1
for
102579702


sot-r.1
for
102581844


sot-r.1
for
102599819


cit-r.1
for
102612391


cit-r.1
for
102612085


cit-r.1
for
102609071


nta-r.1
for
107818034


nta-r.1
for
107767245


cre-r.1
for
CHLRE_17g700950v5


cre-r.1
for
CHLRE_16g658400v5


cre-r.1
for
CHLRE_14g626700v5



Ortholog ID: 404
Species zma zma zma sbi sbi osa osa osa tae tae tae hvu hvu hvu bdi bdi bdi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta cre cre cre
Symbol LOC103653165 LOC100382495 LOC101027099 LOC8064335 LOC8079664 LOC9270637 LOC4334701 LOC4344439 LOC123045401 LOC123057926 LOC123182177 LOC123407397 LOC123430255 LOC123407396 LOC100826463 LOC100826777 LOC100833568 FD3 FD1 FED A LOC100305932 LOC100808254 LOC100807723 LOC101266472 SEND33 LOC101252890 LOC103858315 LOC103838467 LOC103871871 LOC100251971 LOC100266537 LOC100249080 LOC7471708 LOC18098271 LOC7477164 LOC25485576 LOC25485574 LOC11423564 LOC107938315 LOC107960871 LOC107953421 LOC106451716 LOC106392068 LOC106451718 LOC102581844 LOC102599819 LOC102598947 LOC102612391 LOC102612085 LOC102608949 LOC107818034 LOC107780371 LOC107823673 CHLRE_17g700950v5 CHLRE_16g658400v5 CHLRE_14g626700v5
Function* ferredoxin putative ferredoxin-4 chloroplastic ferredoxin 1 ferredoxin ferredoxin-3, chloroplastic ferredoxin, root R-B1 ferredoxin-3, chloroplastic ferredoxin-1, chloroplastic-like ferredoxin-1 ferredoxin-6, chloroplastic ferredoxin-6, chloroplastic ferredoxin-like ferredoxin-1-like ferredoxin, chloroplastic ferredoxin ferredoxin ferredoxin-6, chloroplastic ferredoxin 3 ferredoxin 1 2Fe-2S ferredoxin-like superfamily protein 2Fe-2S ferredoxin-like superfamily protein ferredoxin-A ferredoxin-A ferredoxin, root R-B2 ferredoxin-I uncharacterized LOC101252890 ferredoxin, root R-B2 ferredoxin, leaf L-A ferredoxin-1, chloroplastic ferredoxin, root R-B2 ferredoxin, root R-B1 ferredoxin uncharacterized LOC7471708 ferredoxin ferredoxin, root R-B1 ferredoxin, root R-B1 ferredoxin, root R-B1 ferredoxin ferredoxin, root R-B2 ferredoxin-3, chloroplastic-like ferredoxin-2 ferredoxin-1, chloroplastic-like ferredoxin, root R-B1-like ferredoxin, leaf L-A-like ferredoxin, root R-B2-like ferredoxin-like ferredoxin-like ferredoxin, root R-B2-like ferredoxin, root R-B1-like ferredoxin, root R-B2 ferredoxin, root R-B2 ferredoxin ferredoxin, root R-B2-like uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 4
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma04016 MAPK signaling pathway - plant 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 12
zma03040 Spliceosome 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 7
zma00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 10
sbi00195 Photosynthesis 6
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 5
osa01310 Nitrogen cycle 5
osa01200 Carbon metabolism 3
osa00195 Photosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa03083 Polycomb repressive complex 2
osa04120 Ubiquitin mediated proteolysis 2
osa00195 Photosynthesis 2
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 11
osa00710 Carbon fixation by Calvin cycle 3
osa01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00030 Pentose phosphate pathway 6
tae01200 Carbon metabolism 6
tae00195 Photosynthesis 5
tae00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00030 Pentose phosphate pathway 6
tae01200 Carbon metabolism 6
tae00195 Photosynthesis 5
tae00480 Glutathione metabolism 5
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 5
bdi01200 Carbon metabolism 5
bdi00195 Photosynthesis 3
bdi00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 8
ath00030 Pentose phosphate pathway 6
ath00010 Glycolysis / Gluconeogenesis 4
ath01230 Biosynthesis of amino acids 4
ath00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 3
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 4
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 6
gma01240 Biosynthesis of cofactors 4
gma00195 Photosynthesis 2
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 7
sly04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 7
sly01200 Carbon metabolism 4
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00020 Citrate cycle (TCA cycle) 2
sly00620 Pyruvate metabolism 2
sly00785 Lipoic acid metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00195 Photosynthesis 4
bra00030 Pentose phosphate pathway 3
bra00480 Glutathione metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra01200 Carbon metabolism 5
bra00710 Carbon fixation by Calvin cycle 4
bra00630 Glyoxylate and dicarboxylate metabolism 4
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi01200 Carbon metabolism 2
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 9
vvi00710 Carbon fixation by Calvin cycle 7
vvi00195 Photosynthesis 4
vvi00010 Glycolysis / Gluconeogenesis 4
vvi00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 7
ppo01200 Carbon metabolism 7
ppo00195 Photosynthesis 6
ppo00196 Photosynthesis - antenna proteins 3
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo00030 Pentose phosphate pathway 5
ppo01230 Biosynthesis of amino acids 5
ppo00010 Glycolysis / Gluconeogenesis 4
ppo00051 Fructose and mannose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 4
mtr00195 Photosynthesis 3
mtr01230 Biosynthesis of amino acids 2
mtr01240 Biosynthesis of cofactors 2
mtr00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 4
mtr00195 Photosynthesis 3
mtr01230 Biosynthesis of amino acids 2
mtr01240 Biosynthesis of cofactors 2
mtr00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi00195 Photosynthesis 2
ghi00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 3
ghi00195 Photosynthesis 2
ghi00071 Fatty acid degradation 2
ghi00350 Tyrosine metabolism 2
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 13
ghi00750 Vitamin B6 metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 9
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 16
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 11
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 8
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 8
cit03010 Ribosome 2
cit00195 Photosynthesis 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 3
cit01200 Carbon metabolism 3
cit00030 Pentose phosphate pathway 2
cit01230 Biosynthesis of amino acids 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 5
nta04075 Plant hormone signal transduction 5
nta00195 Photosynthesis 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 6
nta01200 Carbon metabolism 6
nta04146 Peroxisome 5
nta00196 Photosynthesis - antenna proteins 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00330 Arginine and proline metabolism 3
cre00860 Porphyrin metabolism 2
cre00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
cre01200 Carbon metabolism 2
cre00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00710 Carbon fixation by Calvin cycle 6
cre01200 Carbon metabolism 6
cre00195 Photosynthesis 5
cre00190 Oxidative phosphorylation 3
cre00030 Pentose phosphate pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103653165 100382495 101027099 8064335 8079664 9270637 4334701 4344439 123045401 123057926 123182177 123407397 123430255 123407396 100826463 100826777 100833568 817297 837639 842386 100305932 100808254 100807723 101266472 778301 101252890 103858315 103838467 103871871 100251971 100266537 100249080 7471708 18098271 7477164 25485576 25485574 11423564 107938315 107960871 107953421 106451716 106392068 106451718 102581844 102599819 102598947 102612391 102612085 102608949 107818034 107780371 107823673 5717303 5723470 5718285
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