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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100283384   uncharacterized LOC100283384 
 osa-u.5   4330653   E3 ubiquitin protein ligase RIE1 
 ath-u.5   RIE1   RING-finger protein for embryogenesi 
 ath-u.5   AT1G68070   Zinc finger, C3HC4 type (RING finger) family protein 
 gma-u.5   100805848   E3 ubiquitin protein ligase RIE1 
 gma-u.5   100797651   E3 ubiquitin protein ligase RIE1 
 gma-u.5   100816519   E3 ubiquitin protein ligase RIE1 
 ppo-u.5   7457804   E3 ubiquitin protein ligase RIE1 
 mtr-u.5   25482547   E3 ubiquitin protein ligase RIE1 
 mtr-u.5   11417020   E3 ubiquitin protein ligase RIE1 

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Top 50 coexpressed genes to 100283384 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100283384 (zma-u.5 coexpression data)

CoexMap"103654076"


zmaLOC103654076 | Entrez gene ID : 103654076      
Species zma osa ath gma ppo mtr bdi hvu bra vvi cit bna sbi sly ghi sot nta cre tae
Paralog 1 1 2 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (319 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (391 genes)  IEA  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (41 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (251 genes)  IEA  
Protein XP_008679100.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  mito 1,  E.R. 1,  pero 1,  chlo_mito 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  mito_plas 1  (predict for XP_008679100.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_008679100.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100283384
osa-u.5
for
4330653
ath-u.5
for
RIE1
ath-u.5
for
AT1G68070
gma-u.5
for
100805848
gma-u.5
for
100797651
gma-u.5
for
100816519
ppo-u.5
for
7457804
mtr-u.5
for
25482547
mtr-u.5
for
11417020


Ortholog ID: 7136
Species zma sbi osa tae tae hvu bdi ath ath gma gma bra bra ppo mtr mtr ghi ghi bna bna
Symbol LOC100283384 LOC8075747 LOC4330653 LOC123128322 LOC123138169 LOC123403196 LOC100845906 RIE1 AT1G68070 LOC100808028 LOC100816519 LOC103827550 LOC103852443 LOC7457804 LOC25482547 LOC11417020 LOC107943467 LOC107903626 LOC106392350 LOC106389032
Function* uncharacterized LOC100283384 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 RING-finger protein for embryogenesi Zinc finger, C3HC4 type (RING finger) family protein E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1 E3 ubiquitin protein ligase RIE1-like E3 ubiquitin protein ligase RIE1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04120 Ubiquitin mediated proteolysis 3
ppo00190 Oxidative phosphorylation 2
ppo04145 Phagosome 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100283384 8075747 4330653 123128322 123138169 123403196 100845906 814703 843135 100808028 100816519 103827550 103852443 7457804 25482547 11417020 107943467 107903626 106392350 106389032
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