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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103838748   60S ribosomal protein L3-1 
 bra-r.6   103830735   60S ribosomal protein L3-2 
 bra-r.6   103827695   60S ribosomal protein L3-1 
 bna-r.1   125577875   60S ribosomal protein L3-1-like 
 bna-r.1   106371594   60S ribosomal protein L3-1 
 bna-r.1   106432417   60S ribosomal protein L3-1 
 ath-u.5   RP1   ribosomal protein 1 
 ath-u.5   RPL3B   R-protein L3 B 
 ghi-r.1   107933381   60S ribosomal protein L3-2 
 ghi-r.1   107898684   60S ribosomal protein L3-2 
 ghi-r.1   107904925   60S ribosomal protein L3 
 cit-r.1   102611748   60S ribosomal protein L3-2 
 cit-r.1   102619970   60S ribosomal protein L3 
 gma-u.5   100782902   60S ribosomal protein L3 
 gma-u.5   100792174   60S ribosomal protein L3 
 gma-u.5   100819132   60S ribosomal protein L3 
 vvi-u.5   100260533   large ribosomal subunit protein uL3 
 vvi-u.5   100267716   large ribosomal subunit protein uL3y 
 ppo-u.5   112326952   60S ribosomal protein L3-2 
 ppo-u.5   7492475   60S ribosomal protein L3 
 ppo-u.5   7468770   60S ribosomal protein L3 
 mtr-u.5   25493328   60S ribosomal protein L3 
 mtr-u.5   11428007   60S ribosomal protein L3-1 
 sly-u.5   101266871   large ribosomal subunit protein uL3y 
 sly-u.5   RPL3   ribosomal protein L3 
 sot-r.1   102590107   60S ribosomal protein L3-2 
 sot-r.1   102598069   60S ribosomal protein L3-like 
 nta-r.1   107767586   large ribosomal subunit protein uL3y 
 nta-r.1   107799324   large ribosomal subunit protein uL3 
 nta-r.1   107788247   large ribosomal subunit protein uL3 
 osa-u.5   4351604   60S ribosomal protein L3-like 
 osa-u.5   4349878   60S ribosomal protein L3-like 
 zma-u.5   103647029   60S ribosomal protein L3 
 zma-u.5   103646454   60S ribosomal protein L3 
 zma-u.5   101027258   60S ribosomal protein L3 
 tae-r.2   543049   60S ribosomal protein L3 
 tae-r.2   123091434   60S ribosomal protein L3 
 tae-r.2   123120076   60S ribosomal protein L3 
 hvu-r.1   123447985   60S ribosomal protein L3-like 
 hvu-r.1   123399600   60S ribosomal protein L3 
 sbi-r.1   8073619   60S ribosomal protein L3 
 sbi-r.1   8066789   60S ribosomal protein L3 
 bdi-r.1   100843702   60S ribosomal protein L3 
 cre-r.1   CHLRE_10g417700v5   ribosomal protein L3 

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Top 50 coexpressed genes to 103838748 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103838748 (bra-r.6 coexpression data)

CoexMap"103827694"


braLOC103827694 | Entrez gene ID : 103827694    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 2 3 2 3 2 3 2 2 2 3 2 3 3 2 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03010 [list] [network] Ribosome (2036 genes)
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (52 genes)  IEA  
GO:0006412 [list] [network] translation  (893 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (240 genes)  IEA  
GO:0005840 [list] [network] ribosome  (658 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (649 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
Protein XP_009101477.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  cyto 1,  plas 1,  E.R. 1,  chlo_mito 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_009101477.2)
Subcellular
localization
TargetP
other 9  (predict for XP_009101477.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103838748
bra-r.6
for
103830735
bra-r.6
for
103827695
bna-r.1
for
125577875
bna-r.1
for
106371594
bna-r.1
for
106432417
ath-u.5
for
RP1
ath-u.5
for
RPL3B
ghi-r.1
for
107933381
ghi-r.1
for
107898684
ghi-r.1
for
107904925
cit-r.1
for
102611748
cit-r.1
for
102619970
gma-u.5
for
100782902
gma-u.5
for
100792174
gma-u.5
for
100819132
vvi-u.5
for
100260533
vvi-u.5
for
100267716
ppo-u.5
for
112326952
ppo-u.5
for
7492475
ppo-u.5
for
7468770
mtr-u.5
for
25493328
mtr-u.5
for
11428007
sly-u.5
for
101266871
sly-u.5
for
RPL3
sot-r.1
for
102590107
sot-r.1
for
102598069
nta-r.1
for
107767586
nta-r.1
for
107799324
nta-r.1
for
107788247
osa-u.5
for
4351604
osa-u.5
for
4349878
zma-u.5
for
103647029
zma-u.5
for
103646454
zma-u.5
for
101027258
tae-r.2
for
543049
tae-r.2
for
123091434
tae-r.2
for
123120076
hvu-r.1
for
123447985
hvu-r.1
for
123399600
sbi-r.1
for
8073619
sbi-r.1
for
8066789
bdi-r.1
for
100843702
cre-r.1
for
CHLRE_10g417700v5


Ortholog ID: 2184
Species bra bra bra bna bna bna ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC103838748 LOC103849653 LOC103848547 LOC106371594 LOC106410501 LOC106453281 RP1 RPL3B LOC107898684 LOC107910462 LOC107943200 LOC102611748 LOC102619970 LOC100782902 LOC100792174 LOC100819132 LOC100260533 LOC100267716 LOC112326952 LOC7492475 LOC7468770 LOC25493328 LOC11428007 LOC101266871 RPL3 LOC102590107 LOC102598069 LOC107767586 LOC107799324 LOC107768851 LOC4351604 LOC4349878 LOC103647029 LOC103647030 LOC100192516 LOC543049 LOC123102827 LOC123096408 LOC123447985 LOC123399600 LOC8073619 LOC8066789 LOC100843702 CHLRE_10g417700v5
Function* 60S ribosomal protein L3-1 60S ribosomal protein L3-2 60S ribosomal protein L3-1 60S ribosomal protein L3-1 60S ribosomal protein L3-1 60S ribosomal protein L3-2-like ribosomal protein 1 R-protein L3 B 60S ribosomal protein L3-2 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3-2 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3 large ribosomal subunit protein uL3 large ribosomal subunit protein uL3y 60S ribosomal protein L3-2 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3-1 large ribosomal subunit protein uL3y ribosomal protein L3 60S ribosomal protein L3-2 60S ribosomal protein L3-like large ribosomal subunit protein uL3y large ribosomal subunit protein uL3 60S ribosomal protein L3-like 60S ribosomal protein L3-like 60S ribosomal protein L3-like 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3-1 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3-like 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3 60S ribosomal protein L3 ribosomal protein L3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03020 RNA polymerase 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 6
ghi01212 Fatty acid metabolism 6
ghi00780 Biotin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit03040 Spliceosome 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 8
ppo03010 Ribosome 8
ppo00510 N-Glycan biosynthesis 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
nta04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
tae00240 Pyrimidine metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre03013 Nucleocytoplasmic transport 2
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103838748 103849653 103848547 106371594 106410501 106453281 840916 842454 107898684 107910462 107943200 102611748 102619970 100782902 100792174 100819132 100260533 100267716 112326952 7492475 7468770 25493328 11428007 101266871 778284 102590107 102598069 107767586 107799324 107768851 4351604 4349878 103647029 103647030 100192516 543049 123102827 123096408 123447985 123399600 8073619 8066789 100843702 5728341
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