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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103831960   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 bna-r.1   106354527   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 bna-r.1   106403224   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 ath-u.5   ARC3   GTP binding protein 
 ghi-r.1   107922665   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 ghi-r.1   107922529   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 cit-r.1   102608775   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 gma-u.5   100306163   uncharacterized LOC100306163 
 vvi-u.5   100264763   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 ppo-u.5   7462635   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 mtr-u.5   25485592   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 sly-u.5   101258779   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 sot-r.1   102589445   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 nta-r.1   107804253   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 nta-r.1   107759070   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 osa-u.5   4347814   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 zma-u.5   103643007   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 tae-r.2   123122572   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 tae-r.2   123113053   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 tae-r.2   123104763   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 hvu-r.1   123451927   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 sbi-r.1   8077240   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 bdi-r.1   100833206   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 

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Top 50 coexpressed genes to 103831960 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103831960 (bra-r.6 coexpression data)

CoexMap"103831960"


braLOC103831960 | Entrez gene ID : 103831960    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010020 [list] [network] chloroplast fission  (20 genes)  IEA  
GO CC
GO:0035452 [list] [network] extrinsic component of plastid membrane  (1 genes)  IEA  
GO:0009707 [list] [network] chloroplast outer membrane  (47 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1543 genes)  IEA  
GO MF
GO:0005525 [list] [network] GTP binding  (380 genes)  IEA  
Protein XP_009106157.1 [sequence] [blastp]
XP_018508884.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_009106157.1)
chlo 9  (predict for XP_018508884.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_009106157.1)
chlo 5  (predict for XP_018508884.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103831960
bna-r.1
for
106354527
bna-r.1
for
106403224
ath-u.5
for
ARC3
ghi-r.1
for
107922665
ghi-r.1
for
107922529
cit-r.1
for
102608775
gma-u.5
for
100306163
vvi-u.5
for
100264763
ppo-u.5
for
7462635
mtr-u.5
for
25485592
sly-u.5
for
101258779
sot-r.1
for
102589445
nta-r.1
for
107804253
nta-r.1
for
107759070
osa-u.5
for
4347814
zma-u.5
for
103643007
tae-r.2
for
123122572
tae-r.2
for
123113053
tae-r.2
for
123104763
hvu-r.1
for
123451927
sbi-r.1
for
8077240
bdi-r.1
for
100833206


Ortholog ID: 11523
Species bra bna bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC103831960 LOC106354527 LOC106403224 ARC3 LOC107922665 LOC107922529 LOC102608775 LOC100306163 LOC100264763 LOC7462635 LOC25485592 LOC101258779 LOC102589445 LOC107804253 LOC107759070 LOC4347814 LOC103643007 LOC123122572 LOC123113053 LOC123104763 LOC123451927 LOC8077240 LOC100833206
Function* protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic GTP binding protein protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic uncharacterized LOC100306163 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103831960 106354527 106403224 843839 107922665 107922529 102608775 100306163 100264763 7462635 25485592 101258779 102589445 107804253 107759070 4347814 103643007 123122572 123113053 123104763 123451927 8077240 100833206
The preparation time of this page was 2.1 [sec].