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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103833901   RNA-dependent RNA polymerase 2 
 ath-u.5   RDR2   RNA-dependent RNA polymerase 2 
 gma-u.5   100808274   RNA-dependent RNA polymerase 2 
 gma-u.5   100789458   RNA-dependent RNA polymerase 2 
 vvi-u.5   100260325   RNA-dependent RNA polymerase 2 
 ppo-u.5   7457721   RNA-dependent RNA polymerase 2 
 mtr-u.5   11407970   RNA-dependent RNA polymerase 2 
 sly-u.5   101250389   RNA-dependent RNA polymerase 2 
 osa-u.5   4336092   probable RNA-dependent RNA polymerase 2 
 zma-u.5   100502460   RNA-dependent DNA polymerase 

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Top 50 coexpressed genes to 103833901 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103833901 (bra-r.6 coexpression data)

CoexMap"103833901"


braLOC103833901 | Entrez gene ID : 103833901    
Species bra ath gma vvi ppo mtr sly osa zma bdi hvu cit bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030422 [list] [network] siRNA processing  (18 genes)  IEA  
GO CC
GO:0031380 [list] [network] nuclear RNA-directed RNA polymerase complex  (9 genes)  IEA  
GO MF
GO:0003968 [list] [network] RNA-directed RNA polymerase activity  (9 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
Protein XP_009108193.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  plas 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._plas 1  (predict for XP_009108193.1)
Subcellular
localization
TargetP
other 6  (predict for XP_009108193.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103833901
ath-u.5
for
RDR2
gma-u.5
for
100808274
gma-u.5
for
100789458
vvi-u.5
for
100260325
ppo-u.5
for
7457721
mtr-u.5
for
11407970
sly-u.5
for
101250389
osa-u.5
for
4336092
zma-u.5
for
100502460


Ortholog ID: 8075
Species bra bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi bdi
Symbol LOC103833901 LOC106422376 LOC106439671 RDR2 LOC107939800 LOC107939293 LOC102611197 LOC100808274 LOC100789458 LOC100260325 LOC7457721 LOC11407970 LOC101250389 LOC102590975 LOC107814202 LOC107773126 LOC4336092 LOC100502460 LOC123053573 LOC123053576 LOC123426951 LOC8073554 LOC100821561 LOC100830376
Function* RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 RNA-dependent DNA polymerase probable RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04141 Protein processing in endoplasmic reticulum 2
sot04146 Peroxisome 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103833901 106422376 106439671 826714 107939800 107939293 102611197 100808274 100789458 100260325 7457721 11407970 101250389 102590975 107814202 107773126 4336092 100502460 123053573 123053576 123426951 8073554 100821561 100830376
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